RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 ZBTB5O15062 677 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 SPP2Q13103 211 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 GRM4Q14833 912 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 SLC9C1Q4G0N8 1177 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 GIMAP7Q8NHV1 300 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 DCPSQ96C86 337 aaKnown RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 IFT74Q96LB3 600 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 SH2D3AQ9BRG2 576 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 KDM3AQ9Y4C1 1321 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 XRCC5P13010 732 aaKnown RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 ABCB4P21439 1286 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 ERCC5P28715 1186 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 DNAJC21Q5F1R6 531 aaKnown RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 K7ENM7 598 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 FOSP01100 380 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 STAT3P40763 770 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 KIAA0753Q2KHM9 967 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 SARM1Q6SZW1 724 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 MTMR4Q9NYA4 1195 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 E9PMD0 336 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 TNFAIP3P21580 790 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 DNM2P50570 870 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 MNAT1P51948 309 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 TROAPQ12815 778 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 ASIC2Q16515 512 aa12.36□□□□□ -0.43
PTPRF-204ENST00000412568 ENOX1Q8TC92 643 aaKnown RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 IFIH1Q9BYX4 1025 aaKnown RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
PTPRF-204ENST00000412568 BUB1O43683 1085 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 NR2F2P24468 414 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 C10orf67Q8IYJ2 551 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 ANKRD62A6NC57 917 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 ENC1O14682 589 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
PTPRF-204ENST00000412568 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
PTPRF-204ENST00000412568 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
PTPRF-204ENST00000412568 METTL13Q8N6R0 699 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 P2RX5Q93086 422 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 PCIF1Q9H4Z3 704 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 RAVER2Q9HCJ3 691 aaKnown RBP12.35□□□□□ -0.43
PTPRF-204ENST00000412568 GOLGA6L7A0A1B0GV03 622 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 STX10O60499 249 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 CAPN2P17655 700 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 EVX2Q03828 476 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 IQCB1Q15051 598 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
PTPRF-204ENST00000412568 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
PTPRF-204ENST00000412568 AZI2Q9H6S1 392 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 AS3MTQ9HBK9 375 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 ZHX2Q9Y6X8 837 aa12.35□□□□□ -0.43
PTPRF-204ENST00000412568 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 GRIK5Q16478 980 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 SEPT14Q6ZU15 432 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 WRNIP1Q96S55 665 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 TRIM31Q9BZY9 425 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 POTECB2RU33 542 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 ASNSP08243 561 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 PLA2G4BP0C869 781 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 TNNI1P19237 187 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 SFMBT2Q5VUG0 894 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 AK8Q96MA6 479 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 KCNF1Q9H3M0 494 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 LARSQ9P2J5 1176 aaKnown RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 COL4A3BPQ9Y5P4 624 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 PRPF6O94906 941 aaKnown RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 IGBP1P78318 339 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 STRN3Q13033 797 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 NAA30Q147X3 362 aaPredicted RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 DDX12PQ92771 950 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 SECISBP2LQ93073 1101 aaKnown RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 NUP58Q9BVL2 599 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
PTPRF-204ENST00000412568 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
PTPRF-204ENST00000412568 USP27XA6NNY8 438 aa12.33□□□□□ -0.43
PTPRF-204ENST00000412568 LAD1O00515 517 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms