RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 SNX27Q96L92 541 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 TRERF1Q96PN7 1200 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 MTG1Q9BT17 334 aaPredicted RBP7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 UBE2ZQ9H832 354 aaPredicted RBP7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 CD320Q9NPF0 282 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 PDGFCQ9NRA1 345 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 ADD3Q9UEY8 706 aaKnown RBP7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 ISY1Q9ULR0 285 aaKnown RBP7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 NOD1Q9Y239 953 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 ZNF536O15090 1300 aa7.15□□□□□ -1.26
HMGN1P20-201ENST00000411849 ATG2AQ2TAZ0 1938 aa7.15□□□□□ -1.27
HMGN1P20-201ENST00000411849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 IGKV6D-41A0A0C4DH26 115 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 MINDY4BA8MYZ0 360 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 TMEM232C9JQI7 657 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 PARNO95453 639 aaKnown RBP7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 MYL3P08590 195 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 ALAS1P13196 640 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 ATP5JP18859 108 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 NHLH1Q02575 133 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 PPP4R3BQ5MIZ7 849 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 SLFN13Q68D06 897 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 PTCRAQ6ISU1 281 aaPredicted RBP7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 MORC4Q8TE76 937 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 GDPD5Q8WTR4 605 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 CEP95Q96GE4 821 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 MPHOSPH6Q99547 160 aaKnown RBP7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 WDR11Q9BZH6 1224 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 MTMR4Q9NYA4 1195 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 CYP39A1Q9NYL5 469 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 FAM50BQ9Y247 325 aa7.14□□□□□ -1.27
HMGN1P20-201ENST00000411849 PLIN4Q96Q06 1357 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 NKRFO15226 690 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 DCXO43602 365 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 EFCAB14O75071 495 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 HMMRO75330 724 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 ARHGEF15O94989 841 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 KCNA5P22460 613 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 PTGS1P23219 599 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 SLC1A4P43007 532 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 WDR5P61964 334 aaKnown RBP7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 NBPF20Q3BBV1 942 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 SLFNL1Q499Z3 407 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 NSMFQ6X4W1 530 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 LRRC47Q8N1G4 583 aaKnown RBP7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 OR6J1Q8NGC5 347 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 CAGE1Q8TC20 777 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 AFAP1L1Q8TED9 768 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 STAG1Q8WVM7 1258 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 GMCL1Q96IK5 515 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 TGS1Q96RS0 853 aaKnown RBP7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 CRBNQ96SW2 442 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 HAUS7Q99871 368 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 PUS7LQ9H0K6 701 aaKnown RBP7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 BCL11AQ9H165 835 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 BOLA2Q9H3K6 86 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 CTNNA3Q9UI47 895 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 MTUS1Q9ULD2 1270 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 KMT2EQ8IZD2 1858 aa7.13□□□□□ -1.27
HMGN1P20-201ENST00000411849 ABHD14A-ACY1A0A1B0GW23 586 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 RBM47A0AV96 593 aaKnown RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 GRXCR2A6NFK2 248 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 A6NJR5 290 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 GSG1L2A8MUP6 293 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 B4DLN1 442 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PLA2G6O60733 806 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 RAB11FIP3O75154 756 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PRDM1O75626 825 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 SLC3A2P08195 630 aaKnown RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 TSPY3P0CV98 308 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 TSPY8P0CW00 308 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 HOXB1P14653 301 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 GNAT2P19087 354 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 TDO2P48775 406 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 MRPL12P52815 198 aaKnown RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 ERVK-21P61565 698 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PDE4BQ07343 736 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PPP2R5BQ15173 497 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PTGISQ16647 500 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PTPROQ16827 1216 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 TMEM63BQ5T3F8 832 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 CNKSR3Q6P9H4 555 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 NEDD1Q8NHV4 660 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 SCFD2Q8WU76 684 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 RNF25Q96BH1 459 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 FBXL18Q96ME1 805 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 STRBPQ96SI9 672 aaKnown RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 RAD9AQ99638 391 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 SUGCTQ9HAC7 445 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 PRKAG3Q9UGI9 489 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 CCPG1Q9ULG6 757 aa7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 DDX49Q9Y6V7 483 aaKnown RBP7.12□□□□□ -1.27
HMGN1P20-201ENST00000411849 LCHNA4D1U4 455 aa7.11□□□□□ -1.27
HMGN1P20-201ENST00000411849 LINC01553A4QN01 128 aa7.11□□□□□ -1.27
HMGN1P20-201ENST00000411849 GJB5O95377 273 aa7.11□□□□□ -1.27
HMGN1P20-201ENST00000411849 APPP05067 770 aa7.11□□□□□ -1.27
HMGN1P20-201ENST00000411849 ICAM1P05362 532 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms