RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 RANBP6O60518 1105 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 UBTFL1P0CB47 393 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SRGAP2CP0DJJ0 459 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 VCAM1P19320 739 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 RAD23BP54727 409 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CYP4A11Q02928 519 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CYP4A22Q5TCH4 519 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC36Q8IYA8 594 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 NPM3O75607 178 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 GNAI2P04899 355 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 CDH2P19022 906 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 GRK3P35626 688 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 RWDD2BP57060 319 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 RABL6Q3YEC7 729 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 BRDTQ58F21 947 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 RRM2BQ7LG56 351 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 GRK7Q8WTQ7 553 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SKA1Q96BD8 255 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 EIF3CQ99613 913 aaKnown RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 KRCC1Q9NPI7 259 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 BIN2Q9UBW5 565 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-202ENST00000411767 STRIP2Q9ULQ0 834 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 SLC8A2Q9UPR5 921 aa4.97□□□□□ -1.61
PTPN13-202ENST00000411767 LRRIQ3A6PVS8 624 aaPredicted RBP4.96□□□□□ -1.61
PTPN13-202ENST00000411767 TMEM110-MUSTN1A8MSY1 372 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 FAM25AB3EWG3 89 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 FAM25CB3EWG5 89 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 FAM25GB3EWG6 89 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 SURF6O75683 361 aaKnown RBP4.96□□□□□ -1.61
PTPN13-202ENST00000411767 RASA1P20936 1047 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 STX2P32856 288 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 PPP1R2P41236 205 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 RARSP54136 660 aaKnown RBP4.96□□□□□ -1.61
PTPN13-202ENST00000411767 POLE2P56282 527 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 SLFN12LQ6IEE8 588 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 CASC4Q6P4E1 433 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 ARL10Q8N8L6 244 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 SKA2Q8WVK7 121 aaPredicted RBP4.96□□□□□ -1.61
PTPN13-202ENST00000411767 N4BP2L2Q92802 583 aaPredicted RBP4.96□□□□□ -1.61
PTPN13-202ENST00000411767 FAM129AQ9BZQ8 928 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 KRT84Q9NSB2 600 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 DENND2AQ9ULE3 1009 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 TTF2Q9UNY4 1162 aaKnown RBP4.96□□□□□ -1.61
PTPN13-202ENST00000411767 ANKRD6Q9Y2G4 727 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 STK38LQ9Y2H1 464 aa4.96□□□□□ -1.61
PTPN13-202ENST00000411767 CPP00450 1065 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 NCAPHQ15003 741 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 UVSSAQ2YD98 709 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 KRT79Q5XKE5 535 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 PYHIN1Q6K0P9 492 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 VPS50Q96JG6 964 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 DDX19AQ9NUU7 478 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 AKR1B15C9JRZ8 316 aaPredicted RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 ARIH2O95376 493 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 PARP1P09874 1014 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 RFC4P35249 363 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 HNMTP50135 292 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 MYBPC2Q14324 1141 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 SGSM1Q2NKQ1 1148 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TYW1BQ6NUM6 668 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 CKAP2LQ8IYA6 745 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM58Q8NG06 486 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 GPBP1L1Q9HC44 474 aaPredicted RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 PCMTD2Q9NV79 361 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM10Q9UDY6 481 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 BTBD3Q9Y2F9 522 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 KDM4AO75164 1064 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 ALDH1L1O75891 902 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 HSPD1P10809 573 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 WARSP23381 471 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 EPS8Q12929 822 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TRAF3Q13114 568 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 KRT33BQ14525 404 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 CASP8Q14790 479 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 SEPT2Q15019 361 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM47Q96LD4 638 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 MYRFLQ96LU7 910 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 KIAA1468Q9P260 1216 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 KLHL20Q9Y2M5 609 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 PIK3CBP42338 1070 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 DDR2Q16832 855 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 PADI6Q6TGC4 694 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 PLD3Q8IV08 490 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 SYCE1Q8N0S2 351 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 XPO6Q96QU8 1125 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 DMTF1Q9Y222 760 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 STK24Q9Y6E0 443 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 WWP2O00308 870 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 SPARCL1Q14515 664 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TMC6Q7Z403 805 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 CRELD1Q96HD1 420 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 RBBP8Q99708 897 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 LARP6Q9BRS8 491 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 CLSTN2Q9H4D0 955 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 NPHS2Q9NP85 383 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 TYW1Q9NV66 732 aaKnown RBP4.96□□□□□ -1.62
PTPN13-202ENST00000411767 STK17AQ9UEE5 414 aa4.96□□□□□ -1.62
PTPN13-202ENST00000411767 UNC13AQ9UPW8 1703 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TLR3O15455 904 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NR1I2O75469 434 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms