RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 SUCOQ9UBS9 1254 aaKnown RBP4.47□□□□□ -1.69
RNU6-55P-201ENST00000411092 MBD1Q9UIS9 605 aaPredicted RBP4.47□□□□□ -1.69
RNU6-55P-201ENST00000411092 GPR55Q9Y2T6 319 aaPredicted RBP4.47□□□□□ -1.69
RNU6-55P-201ENST00000411092 PCDHGB7Q9Y5F8 929 aa4.47□□□□□ -1.69
RNU6-55P-201ENST00000411092 INO80Q9ULG1 1556 aaPredicted RBP4.47□□□□□ -1.69
RNU6-55P-201ENST00000411092 CLTCL1P53675 1640 aa4.46□□□□□ -1.69
RNU6-55P-201ENST00000411092 ZC3H13Q5T200 1668 aaKnown RBP4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 NRXN1Q9ULB1 1477 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 POLR3AO14802 1390 aaPredicted RBP4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 KANK1Q14678 1352 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 PLEKHH1Q9ULM0 1364 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 WTIPA6NIX2 430 aaPredicted RBP4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 ZNF205O95201 554 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 INHBBP09529 407 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 VAV1P15498 845 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 VIPR1P32241 457 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 SLFN5Q08AF3 891 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 SSPNQ14714 243 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 L1TD1Q5T7N2 865 aaKnown RBP4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 TDRD10Q5VZ19 366 aaKnown RBP4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 GALNT18Q6P9A2 607 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 CCDC144CPQ8IYA2 1237 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 FAM43AQ8N2R8 423 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 FERD3LQ96RJ6 166 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 DSCC1Q9BVC3 393 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 AP5S1Q9NUS5 200 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 PRR13Q9NZ81 148 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 LAS1LQ9Y4W2 734 aaKnown RBP4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 KCTD3Q9Y597 815 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 TAF6LQ9Y6J9 622 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 CHD1O14646 1710 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 NCANO14594 1321 aa4.46□□□□□ -1.7
RNU6-55P-201ENST00000411092 HRKO00198 91 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 SHOXO15266 292 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 GSNP06396 782 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 CT47B1P0C2W7 299 aaPredicted RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 IMPDH2P12268 514 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 PRKCAP17252 672 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 ENDOUP21128 410 aaKnown RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 CEBPAP49715 358 aaPredicted RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 HNRNPMP52272 730 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 PMS1P54277 932 aaKnown RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 ERVFRD-1P60508 538 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 ZNF385BQ569K4 471 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 CC2D1BQ5T0F9 858 aaKnown RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 FBXW10Q5XX13 1052 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 DCAF15Q66K64 600 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 SLCO6A1Q86UG4 719 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 PPFIBP1Q86W92 1011 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 TMEM52Q8NDY8 209 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 CNTD2Q9H8S5 307 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 UPF2Q9HAU5 1272 aaKnown RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 ISY1Q9ULR0 285 aaKnown RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 ZCCHC11Q5TAX3 1644 aaKnown RBP4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 ABCA6Q8N139 1617 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 EFCAB6Q5THR3 1501 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 LMTK2Q8IWU2 1503 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 SHPRHQ149N8 1683 aa4.45□□□□□ -1.7
RNU6-55P-201ENST00000411092 FANCAO15360 1455 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 IQSEC2Q5JU85 1478 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 NSD2O96028 1365 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 ABCA9Q8IUA7 1624 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 A0A1W2PQ45 241 aaPredicted RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 A0A1W2PQY0 241 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 RFXAPO00287 272 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 PRRG2O14669 202 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 TP53P04637 393 aaPredicted RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 MPOP05164 745 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 PI3P19957 117 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 BUD31P41223 144 aaPredicted RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 EPHB3P54753 998 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 RACK1P63244 317 aaKnown RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 CYP4F8P98187 520 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 ZYXQ15942 572 aaKnown RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 RTP2Q5QGT7 225 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 AXDND1Q5T1B0 1012 aaPredicted RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 RUFY4Q6ZNE9 571 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 TAB3Q8N5C8 712 aaPredicted RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 NUP43Q8NFH3 380 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 PMFBP1Q8TBY8 1022 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 PANK1Q8TE04 598 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 BRF1Q92994 677 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 RNF34Q969K3 372 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 SIGLEC10Q96LC7 697 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 PUS7Q96PZ0 661 aaKnown RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 JMJD8Q96S16 334 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 TM9SF2Q99805 663 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 METTL5Q9NRN9 209 aaKnown RBP4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 FAM86C1Q9NVL1 165 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 PPT2Q9UMR5 302 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 ATP7AQ04656 1500 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 REREQ9P2R6 1566 aa4.44□□□□□ -1.7
RNU6-55P-201ENST00000411092 ERVK-7P63135 1459 aa4.43□□□□□ -1.7
RNU6-55P-201ENST00000411092 NLRP1Q9C000 1473 aa4.43□□□□□ -1.7
RNU6-55P-201ENST00000411092 ADGRB3O60242 1522 aa4.43□□□□□ -1.7
RNU6-55P-201ENST00000411092 PPRC1Q5VV67 1664 aaKnown RBP4.43□□□□□ -1.7
RNU6-55P-201ENST00000411092 ZBTB7CA1YPR0 619 aa4.43□□□□□ -1.7
RNU6-55P-201ENST00000411092 B8ZZF3 427 aa4.43□□□□□ -1.7
RNU6-55P-201ENST00000411092 H0Y8X5 98 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms