RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ARSHQ5FYA8 562 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 VHLLQ6RSH7 139 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 RPTNQ6XPR3 784 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 RNF111Q6ZNA4 994 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CARFQ8N187 725 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 HNRNPLLQ8WVV9 542 aaKnown RBP3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 DEPDC7Q96QD5 511 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ASPNQ9BXN1 380 aa3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 POLR3KQ9Y2Y1 108 aaPredicted RBP3.76□□□□□ -1.81
RNU6-1140P-201ENST00000410517 IFT140Q96RY7 1462 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CCDC163A0A0D9SF12 145 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 RGS13O14921 159 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ENDOUP21128 410 aaKnown RBP3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ETFBP38117 255 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 INHBEP58166 350 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 RASGRF1Q13972 1273 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 BMS1Q14692 1282 aaKnown RBP3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CBX2Q14781 532 aaPredicted RBP3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 MTERF2Q49AM1 385 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 NBPF12Q5TAG4 269 aaPredicted RBP3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 GALNT18Q6P9A2 607 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 POMZP3Q6PJE2 187 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SYNPOQ8N3V7 929 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ATG4CQ96DT6 458 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FOXP3Q9BZS1 431 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 MKRN2Q9H000 416 aaKnown RBP3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PRR13Q9NZ81 148 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CDK11AQ9UQ88 783 aaPredicted RBP3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FAN1Q9Y2M0 1017 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 TAF6LQ9Y6J9 622 aa3.75□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FANCD2Q9BXW9 1451 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SSU72P8A0A1W2PR75 194 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PDPK1O15530 556 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 KLF4O43474 513 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PRKCAP17252 672 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PMS1P54277 932 aaKnown RBP3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CYP4F8P98187 520 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FHL2Q14192 279 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 GNPTABQ3T906 1256 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PLEKHN1Q494U1 663 aaPredicted RBP3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 HEATR6Q6AI08 1181 aaKnown RBP3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CYB5RLQ6IPT4 315 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ZC3H14Q6PJT7 736 aaKnown RBP3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 GLB1LQ6UWU2 654 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ZPBP2Q6X784 338 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FAM178BQ8IXR5 827 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CCDC144CPQ8IYA2 1237 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 USHBP1Q8N6Y0 703 aa3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ACSF2Q96CM8 615 aaPredicted RBP3.74□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CFTRP13569 1480 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ZNF536O15090 1300 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 LTBP3Q9NS15 1303 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 A0A1W2PQH9 124 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 TLDC2A0PJX2 215 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ANKRD34BA5PLL1 514 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 WTIPA6NIX2 430 aaPredicted RBP3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 NOP56O00567 594 aaKnown RBP3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FKTNO75072 461 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PPM1BO75688 479 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ITGA4P13612 1032 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ATXN1P54253 815 aaKnown RBP3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 HTRA3P83110 453 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SERINC3Q13530 473 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 LONRF2Q1L5Z9 754 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 NBPF9Q3BBW0 867 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 HSF5Q4G112 596 aaPredicted RBP3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 UNC5AQ6ZN44 842 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 LIMS2Q7Z4I7 341 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 HOMER1Q86YM7 354 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ZSWIM2Q8NEG5 633 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 RNF141Q8WVD5 230 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 APPBP2Q92624 585 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SGSM3Q96HU1 749 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SLC6A18Q96N87 628 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 APBA2Q99767 749 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SNTG2Q9NY99 539 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 LRP2BPQ9P2M1 347 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SUCOQ9UBS9 1254 aaKnown RBP3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PCDHB12Q9Y5F1 795 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CORINQ9Y5Q5 1042 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ARHGEF11O15085 1522 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PCSK5Q92824 1860 aa3.73□□□□□ -1.81
RNU6-1140P-201ENST00000410517 TMEM82A0PJX8 343 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CCDC85CA6NKD9 419 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 PPP1R12AO14974 1030 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ATF2P15336 505 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 NAT1P18440 290 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 IBSPP21815 317 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 LMO1P25800 156 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 HSD3B2P26439 372 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 MAPKAPK2P49137 400 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 MVKQ03426 396 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 DLX2Q07687 328 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 NOL9Q5SY16 702 aaKnown RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 RNF187Q5TA31 235 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CWF19L1Q69YN2 538 aaKnown RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ZNF761Q86XN6 746 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 THAP3Q8WTV1 239 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 CDK5RAP1Q96SZ6 601 aaKnown RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 KLC2Q9H0B6 622 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms