RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 FAM184BQ9ULE4 1060 aa16.14■□□□□ 0.17
GYPC-203ENST00000409836 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
GYPC-203ENST00000409836 CAPN15O75808 1086 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 FARP2O94887 1054 aaPredicted RBP16.13■□□□□ 0.17
GYPC-203ENST00000409836 RARBP10826 455 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 SCG2P13521 617 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 GLT8D2Q9H1C3 349 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 UPF2Q9HAU5 1272 aaKnown RBP16.13■□□□□ 0.17
GYPC-203ENST00000409836 NCOA5Q9HCD5 579 aaKnown RBP16.13■□□□□ 0.17
GYPC-203ENST00000409836 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
GYPC-203ENST00000409836 Q9Y3F1 56 aa16.13■□□□□ 0.17
GYPC-203ENST00000409836 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
GYPC-203ENST00000409836 NEK4P51957 841 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 SCRN1Q12765 414 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 HEATR3Q7Z4Q2 680 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 FBXO16Q8IX29 292 aaPredicted RBP16.12■□□□□ 0.17
GYPC-203ENST00000409836 CCDC82Q8N4S0 544 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
GYPC-203ENST00000409836 GTF3C6Q969F1 213 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 ZMYND12Q9H0C1 365 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
GYPC-203ENST00000409836 CEP290O15078 2479 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 SYNRGQ9UMZ2 1314 aa16.12■□□□□ 0.17
GYPC-203ENST00000409836 SCN10AQ9Y5Y9 1956 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 CTAGE5O15320 804 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 STAM2O75886 525 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 CNGA1P29973 690 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
GYPC-203ENST00000409836 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
GYPC-203ENST00000409836 GJA9P57773 515 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 PDE4DQ08499 809 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 PGM5Q15124 567 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 RABEP1Q15276 862 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 IQSEC1Q6DN90 963 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
GYPC-203ENST00000409836 XRRA1Q6P2D8 792 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 SCFD2Q8WU76 684 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 PIBF1Q8WXW3 757 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 PSTPIP2Q9H939 334 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 SH3GLB2Q9NR46 395 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 NAP1L2Q9ULW6 460 aaPredicted RBP16.11■□□□□ 0.17
GYPC-203ENST00000409836 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
GYPC-203ENST00000409836 NKRFO15226 690 aaKnown RBP eCLIP16.1■□□□□ 0.17
GYPC-203ENST00000409836 CDKL5O76039 1030 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 LARGE1O95461 756 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 TFRCP02786 760 aaKnown RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 NR3C2P08235 984 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 NAPAP54920 295 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 CCT2P78371 535 aaKnown RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 AP3B2Q13367 1082 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 LRRC41Q15345 812 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 STXBP2Q15833 593 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 ME3Q16798 604 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 DUSP28Q4G0W2 176 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 CPLX2Q6PUV4 134 aaKnown RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 VSIG10LQ86VR7 867 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 CCDC12Q8WUD4 166 aaPredicted RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 CUL5Q93034 780 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 PHKBQ93100 1093 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 INPP4AQ96PE3 977 aaPredicted RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 SLKQ9H2G2 1235 aaPredicted RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 XPNPEP3Q9NQH7 507 aa16.1■□□□□ 0.17
GYPC-203ENST00000409836 DDX49Q9Y6V7 483 aaKnown RBP16.1■□□□□ 0.17
GYPC-203ENST00000409836 DNAH12Q6ZR08 3092 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 CPLX1O14810 134 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
GYPC-203ENST00000409836 RGS20O76081 388 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 DEXIO95424 95 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 ADCYAP1R1P41586 468 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 MLLT1Q03111 559 aaPredicted RBP16.09■□□□□ 0.17
GYPC-203ENST00000409836 ST3GAL1Q11201 340 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 PCNX4Q63HM2 1172 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 MCTP2Q6DN12 878 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 USP17L6PQ6QN14 398 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 IL31RAQ8NI17 732 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 DIS3LQ8TF46 1054 aaKnown RBP16.09■□□□□ 0.17
GYPC-203ENST00000409836 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 LENG1Q96BZ8 264 aaPredicted RBP16.09■□□□□ 0.17
GYPC-203ENST00000409836 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
GYPC-203ENST00000409836 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
GYPC-203ENST00000409836 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.08■□□□□ 0.16
GYPC-203ENST00000409836 CTDNEP1O95476 244 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 FOSP01100 380 aaPredicted RBP16.08■□□□□ 0.16
GYPC-203ENST00000409836 SMPD1P17405 629 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 EIF2AK2P19525 551 aaKnown RBP16.08■□□□□ 0.16
GYPC-203ENST00000409836 CCND2P30279 289 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 ADCY7P51828 1080 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 TNFAIP2Q03169 654 aa16.08■□□□□ 0.16
GYPC-203ENST00000409836 SNX17Q15036 470 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms