RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 CAVIN3Q969G5 261 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 JPH2Q9BR39 696 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-205ENST00000409455 RNF41Q9H4P4 317 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-205ENST00000409455 AGPAT5Q9NUQ2 364 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 MYH13Q9UKX3 1938 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-205ENST00000409455 PDE6BP35913 854 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.34
LIMS2-205ENST00000409455 FNTAP49354 379 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 ZBED6P86452 979 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 CYP27A1Q02318 531 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 YTHDF3Q7Z739 585 aaKnown RBP17.15■□□□□ 0.34
LIMS2-205ENST00000409455 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 ADSSL1Q8N142 457 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 TSEN2Q8NCE0 465 aaKnown RBP17.15■□□□□ 0.34
LIMS2-205ENST00000409455 TRIM47Q96LD4 638 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 EXOC1Q9NV70 894 aa17.15■□□□□ 0.34
LIMS2-205ENST00000409455 B4DLN1 442 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 PRDM1O75626 825 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 NPR1P16066 1061 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 PRLRP16471 622 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 SLC7A5Q01650 507 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 PPARAQ07869 468 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 PKN1Q16512 942 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 DONSONQ9NYP3 566 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 KIF1CO43896 1103 aaKnown RBP17.14■□□□□ 0.33
LIMS2-205ENST00000409455 TCP1P17987 556 aaKnown RBP17.14■□□□□ 0.33
LIMS2-205ENST00000409455 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
LIMS2-205ENST00000409455 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 NNTQ13423 1086 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 CCDC42Q96M95 316 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 TTYH3Q9C0H2 523 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
LIMS2-205ENST00000409455 PSMA7O14818 248 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 TNFRSF8P28908 595 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 C8orf74Q6P047 294 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 DEFB132Q7Z7B7 95 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-205ENST00000409455 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 EPN3Q9H201 632 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 LSP1P33241 339 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 STAT6P42226 847 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 APBA1Q02410 837 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 HYOU1Q9Y4L1 999 aa17.13■□□□□ 0.33
LIMS2-205ENST00000409455 TNKSO95271 1327 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 PRPF3O43395 683 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 NAP1L1P55209 391 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 GRIK5Q16478 980 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 SH2D3CQ8N5H7 860 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 GIMAP7Q8NHV1 300 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 OSBPL9Q96SU4 736 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 TUBGCP2Q9BSJ2 902 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 PAGR1Q9BTK6 254 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 IFIH1Q9BYX4 1025 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 CAPN6Q9Y6Q1 641 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 KRT14P02533 472 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 PMS1P54277 932 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 MRPS25P82663 173 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 CDK17Q00537 523 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 NAA35Q5VZE5 725 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 HAUS3Q68CZ6 603 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 SPTY2D1Q68D10 685 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 TNFRSF25Q93038 417 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 SH2D4AQ9H788 454 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
LIMS2-205ENST00000409455 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
LIMS2-205ENST00000409455 CHUKO15111 745 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
LIMS2-205ENST00000409455 SMCR8Q8TEV9 937 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-205ENST00000409455 MASTLQ96GX5 879 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-205ENST00000409455 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 SMIM22K7EJ46 135 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
LIMS2-205ENST00000409455 IL1R1P14778 569 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 MCM7P33993 719 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 CFAP58Q5T655 872 aa17.11■□□□□ 0.33
LIMS2-205ENST00000409455 RNF187Q5TA31 235 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-205ENST00000409455 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.33
LIMS2-205ENST00000409455 SUFUQ9UMX1 484 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms