RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NAA25Q14CX7 972 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 MIS18BP1Q6P0N0 1132 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 LRIG3Q6UXM1 1119 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 SDCCAG8Q86SQ7 713 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 CEP57Q86XR8 500 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 TRIM58Q8NG06 486 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 CUL5Q93034 780 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 BORCS6Q96GS4 357 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 MED15Q96RN5 788 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 MINPP1Q9UNW1 487 aa11.79□□□□□ -0.52
NIF3L1-204ENST00000409357 KRT86O43790 486 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ECE2O60344 883 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 LUC7L3O95232 432 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 FERP16591 822 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 KLRK1P26718 216 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 CASP14P31944 242 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 RAB27AP51159 221 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 RNF187Q5TA31 235 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 MAP1SQ66K74 1059 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 CAPRIN2Q6IMN6 1127 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 LDHDQ86WU2 507 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ARL8AQ96BM9 186 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 SPDL1Q96EA4 605 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 RNPC3Q96LT9 517 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 RNF14Q9UBS8 474 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 GGA1Q9UJY5 639 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 C15orf41Q9Y2V0 281 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ZNF609O15014 1411 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 XDHP47989 1333 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 A0A0U1RQJ8 604 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 GMNCA6NCL1 334 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 A6NHS1 94 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 PDLIM1O00151 329 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 SNAP23O00161 211 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 TEX33O43247 280 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 COQ9O75208 318 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 RTN3O95197 1032 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ATP6V1G2O95670 118 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ALADP13716 330 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 NR1D1P20393 614 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 IFT88Q13099 833 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 CUL4BQ13620 913 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 CMPK2Q5EBM0 449 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 SPECC1Q5M775 1068 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 CIAPIN1Q6FI81 312 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 BZW1Q7L1Q6 419 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 TEX9Q8N6V9 391 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ACRBPQ8NEB7 543 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ATRIPQ8WXE1 791 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 JAKMIP2Q96AA8 810 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 CYFIP2Q96F07 1278 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 ATP6V1G3Q96LB4 118 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 OSBPL7Q9BZF2 842 aa11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 SAMSN1Q9NSI8 373 aaKnown RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-204ENST00000409357 PASKQ96RG2 1323 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 ITGBL1O95965 494 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 PDHBP11177 359 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 SCTRP47872 440 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 CDK17Q00537 523 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 SLC9C2Q5TAH2 1124 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 TXNRD3Q86VQ6 643 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 ZNF594Q96JF6 807 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 SEC62Q99442 399 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 DNAJC7Q99615 494 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 TSGA10Q9BZW7 698 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 BOLA2Q9H3K6 86 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 NOD2Q9HC29 1040 aa11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 REXO2Q9Y3B8 237 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-204ENST00000409357 A0A1W2PQC6 194 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 E7EWF7 191 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 DNM1LO00429 736 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 EGFRP00533 1210 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 ATP1A1P05023 1023 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 TCP1P17987 556 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 ELF3P78545 371 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 ROR2Q01974 943 aaKnown RBP11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 ITGB3BPQ13352 177 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 BLMHQ13867 455 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 MEA1Q16626 185 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
NIF3L1-204ENST00000409357 TTC39AQ5SRH9 613 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms