RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SLC16A2P36021 539 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 NHLH1Q02575 133 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 RAB30Q15771 203 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 MCMDC2Q4G0Z9 681 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TTBK2Q6IQ55 1244 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 NSMFQ6X4W1 530 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 EEPD1Q7L9B9 569 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TLK2Q86UE8 772 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TICAM2Q86XR7 235 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 ANKS1AQ92625 1134 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 FAM227BQ96M60 508 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TMEM47Q9BQJ4 181 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 SEZ6LQ9BYH1 1024 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 RANBP17Q9H2T7 1088 aaKnown RBP10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 CERS4Q9HA82 394 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TOMM22Q9NS69 142 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TCP11L1Q9NUJ3 509 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 TRIOO75962 3097 aa10.81□□□□□ -0.68
NIF3L1-203ENST00000409129 A0A0D9SFI3 127 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 HSPD1P10809 573 aaKnown RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 PTGS1P23219 599 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 CYP2C18P33260 490 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 HDAC1Q13547 482 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 BAATQ14032 418 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 TMEM63BQ5T3F8 832 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 SYDE2Q5VT97 1194 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 PPP2R2DQ66LE6 453 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 PSRC1Q6PGN9 363 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 KIAA1211Q6ZU35 1233 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 FBXO16Q8IX29 292 aaPredicted RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 TET1Q8NFU7 2136 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 CRBNQ96SW2 442 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 ADD3Q9UEY8 706 aaKnown RBP10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 MTCH2Q9Y6C9 303 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 GRIN2DO15399 1336 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 UMODL1Q5DID0 1318 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 ZDBF2Q9HCK1 2354 aa10.8□□□□□ -0.68
NIF3L1-203ENST00000409129 LOC102724159A0A0B4J2E5 919 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 PI4K2BG5E9Z4 385 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 FGBP02675 491 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 PWP2Q15269 919 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 DUSP28Q4G0W2 176 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 TTC14Q96N46 770 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 UIMC1Q96RL1 719 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 PHOX2BQ99453 314 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 TRPV6Q9H1D0 765 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 ZMYM6O95789 1325 aa10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 FRMPD2Q68DX3 1309 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-203ENST00000409129 PTPDC1A2A3K4 754 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 TRIM6-TRIM34B2RNG4 842 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 NFIBO00712 420 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 PDHBP11177 359 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 ALDH5A1P51649 535 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 HAND2P61296 217 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 PSMC6P62333 389 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 MFSD6Q6ZSS7 791 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 ZNF589Q86UQ0 364 aaPredicted RBP10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 HERVK_113Q902F9 699 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 PNMA2Q9UL42 364 aa10.78□□□□□ -0.68
NIF3L1-203ENST00000409129 TRIP12Q14669 1992 aaPredicted RBP10.77□□□□□ -0.68
NIF3L1-203ENST00000409129 SPTBN4Q9H254 2564 aa10.77□□□□□ -0.68
NIF3L1-203ENST00000409129 C5orf42Q9H799 3197 aa10.77□□□□□ -0.68
NIF3L1-203ENST00000409129 RBM47A0AV96 593 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 B4GALT4O60513 344 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 ARHGEF15O94989 841 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 PCP11498 1178 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 CALML3P27482 149 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 CCL23P55773 120 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 ZNF543Q08ER8 600 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 RNF207Q6ZRF8 634 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 SPRED2Q7Z698 418 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 CLEC4DQ8WXI8 215 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 RILPL2Q969X0 211 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 FBXL18Q96ME1 805 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 MTIF3Q9H2K0 278 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 POLR3EQ9NVU0 708 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
NIF3L1-203ENST00000409129 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 CPT1AP50416 773 aa10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 MFAP1P55081 439 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 SLC30A10Q6XR72 485 aa10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 RPUSD2Q8IZ73 545 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 MPHOSPH6Q99547 160 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-203ENST00000409129 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms