RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 CAPZA3Q96KX2 299 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 RNPC3Q96LT9 517 aaKnown RBP3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 CEP63Q96MT8 703 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 SCLT1Q96NL6 688 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 CLIC6Q96NY7 704 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCDC77Q9BR77 488 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 LRRC1Q9BTT6 524 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 TMEM109Q9BVC6 243 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 PHF20Q9BVI0 1012 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 IRX2Q9BZI1 471 aaPredicted RBP3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 MIS12Q9H081 205 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 VCX3BQ9H321 246 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPCSQ9HAB8 311 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 SUGCTQ9HAC7 445 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 LGR6Q9HBX8 967 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 VCX3AQ9NNX9 186 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPANQ9NQ55 473 aaKnown RBP3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 TXLNGQ9NUQ3 528 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 USP40Q9NVE5 1235 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 HAUS2Q9NVX0 235 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 ETAA1Q9NY74 926 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 TAB2Q9NYJ8 693 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 CEP72Q9P209 647 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANKIB1Q9P2G1 1089 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 STK17AQ9UEE5 414 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANAPC4Q9UJX5 808 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 PHF8Q9UPP1 1060 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 TRPC6Q9Y210 931 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 C15orf41Q9Y2V0 281 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 RIPOR2Q9Y4F9 1068 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 MROH5Q6ZUA9 1318 aa3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 ZC3H4Q9UPT8 1303 aaKnown RBP3.12□□□□□ -1.91
SNORD88.1-201ENST00000408684 BCL9LQ86UU0 1499 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 A0A087WWV3 80 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCDC194A0A1B0GVG4 234 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCDC189A1A4V9 331 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MACROD2A1Z1Q3 448 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ANKRD33BA6NCL7 494 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 RASSF10A6NK89 507 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 B4E1Z4 1266 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ERVV-2B6SEH9 535 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDLIM1O00151 329 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MYO1FO00160 1098 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PGRMC1O00264 195 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ENC1O14682 589 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPIP5K2O43314 1243 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PPP1R12BO60237 982 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 RANBP6O60518 1105 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 DCTN3O75935 186 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SNUPNO95149 360 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PCCAP05165 728 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NUDT17P0C025 328 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PRR29P0C7W0 189 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MYL6BP14649 208 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ATP2A2P16615 1042 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SMARCA1P28370 1054 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ARID4AP29374 1257 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 GNA11P29992 359 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MAN1A1P33908 653 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PRCPP42785 496 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SCTRP47872 440 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TOB1P50616 345 aaPredicted RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ATP1A2P50993 1020 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CLCN2P51788 898 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CASP7P55210 303 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 STX17P56962 302 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CABP4P57796 275 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 HAND2P61296 217 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TIMM10P62072 90 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 HERVK_113P62684 666 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 FOXO4P98177 505 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 FKBP3Q00688 224 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ROR2Q01974 943 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 GUCY2DQ02846 1103 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CAV1Q03135 178 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 C2orf54Q08AI8 447 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 CCDC15Q0P6D6 951 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 GRIK3Q13003 919 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PTGDRQ13258 359 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PDIA6Q15084 440 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PUM3Q15397 648 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NAB2Q15742 525 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SLC18A3Q16572 532 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SKIDA1Q1XH10 827 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TMEM266Q2M3C6 531 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SGSM1Q2NKQ1 1148 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 PARP6Q2NL67 630 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TDRD12Q587J7 1177 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 TTMPQ5BVD1 217 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 METTL24Q5JXM2 366 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 ERMARDQ5T6L9 678 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 IFIT1BQ5T764 474 aaKnown RBP3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 MEI1Q5TIA1 1274 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 SFMBT2Q5VUG0 894 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 NBPF6Q5VWK0 638 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 HAUS3Q68CZ6 603 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 DENND2CQ68D51 928 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 OTUD7BQ6GQQ9 843 aa3.11□□□□□ -1.91
SNORD88.1-201ENST00000408684 HIBCHQ6NVY1 386 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms