RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 ZSCAN29Q8IWY8 852 aaPredicted RBP18.48■□□□□ 0.55
COL23A1-202ENST00000407622 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 TBC1D16Q8TBP0 767 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 GJA10Q969M2 543 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 CCDC47Q96A33 483 aaKnown RBP18.48■□□□□ 0.55
COL23A1-202ENST00000407622 CALML4Q96GE6 196 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 CAMKK2Q96RR4 588 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 MTMR4Q9NYA4 1195 aa18.48■□□□□ 0.55
COL23A1-202ENST00000407622 FOCADQ5VW36 1801 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 PLCG2P16885 1265 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 ERCC3P19447 782 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 FAM193AP78312 1265 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 EZH2Q15910 746 aaKnown RBP18.47■□□□□ 0.55
COL23A1-202ENST00000407622 KCNK18Q7Z418 384 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 KIAA1328Q86T90 577 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 NLGN1Q8N2Q7 840 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 GLIS3Q8NEA6 775 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 JAKMIP2Q96AA8 810 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 FAM163AQ96GL9 167 aaPredicted RBP18.47■□□□□ 0.55
COL23A1-202ENST00000407622 MMS19Q96T76 1030 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 PDE11AQ9HCR9 933 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 GPCPD1Q9NPB8 672 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 LRWD1Q9UFC0 647 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 L1RE1Q9UN81 338 aa18.47■□□□□ 0.55
COL23A1-202ENST00000407622 F8W031 263 aaPredicted RBP18.46■□□□□ 0.55
COL23A1-202ENST00000407622 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 ZNF263O14978 683 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 ZBED6P86452 979 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 CNNM4Q6P4Q7 775 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 DDX4Q9NQI0 724 aaKnown RBP18.46■□□□□ 0.55
COL23A1-202ENST00000407622 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
COL23A1-202ENST00000407622 UBE2SQ16763 222 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 CENPPQ6IPU0 288 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 DPP8Q6V1X1 898 aaPredicted RBP18.46■□□□□ 0.55
COL23A1-202ENST00000407622 SV2BQ7L1I2 683 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 KRT26Q7Z3Y9 468 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 CAPZA3Q96KX2 299 aa18.46■□□□□ 0.55
COL23A1-202ENST00000407622 RGPD3A6NKT7 1758 aaPredicted RBP18.45■□□□□ 0.54
COL23A1-202ENST00000407622 RGPD4Q7Z3J3 1758 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 N4BP1O75113 896 aaKnown RBP18.45■□□□□ 0.54
COL23A1-202ENST00000407622 ADCY7P51828 1080 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 GTF2IP78347 998 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 AMPD3Q01432 767 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 FAM114A1Q8IWE2 563 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 LARP4BQ92615 738 aaKnown RBP18.45■□□□□ 0.54
COL23A1-202ENST00000407622 ERGIC2Q96RQ1 377 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL23A1-202ENST00000407622 KRT83P78385 493 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 GABPAQ06546 454 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 ECM1Q16610 540 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 NUP58Q9BVL2 599 aa18.45■□□□□ 0.54
COL23A1-202ENST00000407622 EIF3CLB5ME19 914 aaKnown RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 CYLC1P35663 651 aaPredicted RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 TNNI2P48788 182 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 PAPD7Q5XG87 772 aaKnown RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 TTBK2Q6IQ55 1244 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 HDXQ7Z353 690 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 RETREG2Q8NC44 543 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 UIMC1Q96RL1 719 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 EIF3CQ99613 913 aaKnown RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 MXD3Q9BW11 206 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 PLIN4Q96Q06 1357 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 MACROD2A1Z1Q3 448 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 ZNF185O15231 689 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 LRRC41Q15345 812 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 COBLL1Q53SF7 1204 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 UNC13DQ70J99 1090 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 FAM207AQ9NSI2 230 aaPredicted RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 ZNHIT6Q9NWK9 470 aaKnown RBP18.44■□□□□ 0.54
COL23A1-202ENST00000407622 SIK3Q9Y2K2 1263 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 SAR1BQ9Y6B6 198 aa18.44■□□□□ 0.54
COL23A1-202ENST00000407622 IGKV6D-41A0A0C4DH26 115 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 IDEP14735 1019 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 ATP2B2Q01814 1243 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 SNX29Q8TEQ0 813 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 JMJD4Q9H9V9 463 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 MYH7BA7E2Y1 1941 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 KRT86O43790 486 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 ERLIN1O75477 346 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 SLC16A2P36021 539 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 VWA3BQ502W6 1294 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 ZNF662Q6ZS27 426 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 CERS5Q8N5B7 392 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 RAD54LQ92698 747 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 ARHGAP20Q9P2F6 1191 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 STK17AQ9UEE5 414 aa18.43■□□□□ 0.54
COL23A1-202ENST00000407622 ADAMTSL1Q8N6G6 1762 aa18.42■□□□□ 0.54
COL23A1-202ENST00000407622 PDE2AO00408 941 aaPredicted RBP18.42■□□□□ 0.54
COL23A1-202ENST00000407622 ORC2Q13416 577 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms