RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 MASP1P48740 699 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 CORO7P57737 925 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 NLRX1Q86UT6 975 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 FLAD1Q8NFF5 587 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 PLEKHO2Q8TD55 490 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 CCDC120Q96HB5 630 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 C19orf44Q9H6X5 657 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 ZFP64Q9NPA5 681 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 GULP1Q9UBP9 304 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 PCDHA2Q9Y5H9 948 aa9.12□□□□□ -0.95
PTPN12-202ENST00000407343 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
PTPN12-202ENST00000407343 BCL6P41182 706 aa9.11□□□□□ -0.95
PTPN12-202ENST00000407343 ZNF460Q14592 562 aa9.11□□□□□ -0.95
PTPN12-202ENST00000407343 ABHD17CQ6PCB6 329 aa9.11□□□□□ -0.95
PTPN12-202ENST00000407343 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
PTPN12-202ENST00000407343 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
PTPN12-202ENST00000407343 INTS7Q9NVH2 962 aaKnown RBP9.11□□□□□ -0.95
PTPN12-202ENST00000407343 PCDHA8Q9Y5H6 950 aa9.11□□□□□ -0.95
PTPN12-202ENST00000407343 TIMM13Q9Y5L4 95 aaPredicted RBP9.11□□□□□ -0.95
PTPN12-202ENST00000407343 WTIPA6NIX2 430 aaPredicted RBP9.1□□□□□ -0.95
PTPN12-202ENST00000407343 WNT9AO14904 365 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 NPHS1O60500 1241 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 THNSL2Q86YJ6 484 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 SPPL2CQ8IUH8 684 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 OXR1Q8N573 874 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 PCDH19Q8TAB3 1148 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 ADGRE2Q9UHX3 823 aa9.1□□□□□ -0.95
PTPN12-202ENST00000407343 TNPO3Q9Y5L0 923 aaKnown RBP9.1□□□□□ -0.95
PTPN12-202ENST00000407343 GSG1L2A8MUP6 293 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 CKMP06732 381 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 VIL1P09327 827 aaKnown RBP9.09□□□□□ -0.95
PTPN12-202ENST00000407343 FPR2P25090 351 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
PTPN12-202ENST00000407343 LSAMPQ13449 338 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 FYB2Q5VWT5 728 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 GALNT18Q6P9A2 607 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 JAMLQ86YT9 394 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 MAGEC2Q9UBF1 373 aaPredicted RBP9.09□□□□□ -0.95
PTPN12-202ENST00000407343 RWDD3Q9Y3V2 267 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 PRKAB1Q9Y478 270 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 TAF6LQ9Y6J9 622 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 X6R8D5 127 aa9.09□□□□□ -0.95
PTPN12-202ENST00000407343 CLSTN1O94985 981 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 POU3F2P20265 443 aaPredicted RBP9.08□□□□□ -0.96
PTPN12-202ENST00000407343 GALK1P51570 392 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 GUCY1A3Q02108 690 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 KIZQ2M2Z5 673 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 LRRTM3Q86VH5 581 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 TEX2Q8IWB9 1127 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 LILRA2Q8N149 483 aa9.08□□□□□ -0.96
PTPN12-202ENST00000407343 MAGEB10Q96LZ2 347 aaPredicted RBP9.08□□□□□ -0.96
PTPN12-202ENST00000407343 TARS2Q9BW92 718 aaKnown RBP9.08□□□□□ -0.96
PTPN12-202ENST00000407343 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
PTPN12-202ENST00000407343 ASLP04424 464 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 PRKCAP17252 672 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 SLC14A2Q15849 920 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 MTDHQ86UE4 582 aaKnown RBP9.07□□□□□ -0.96
PTPN12-202ENST00000407343 MYLIPQ8WY64 445 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 GPATCH3Q96I76 525 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 IPPKQ9H8X2 491 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 PDLIM7Q9NR12 457 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.07□□□□□ -0.961e-8■■■■■ 37.9
PTPN12-202ENST00000407343 MARCH2Q9P0N8 246 aa9.07□□□□□ -0.96
PTPN12-202ENST00000407343 ANKRD62A6NC57 917 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 H7BY64 318 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 SOD2P04179 222 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 GRK2P25098 689 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 GRK3P35626 688 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 GTF2A2P52657 109 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 RNF180Q86T96 592 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 NUP43Q8NFH3 380 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 DDX1Q92499 740 aaKnown RBP9.06□□□□□ -0.96
PTPN12-202ENST00000407343 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 RNF32Q9H0A6 362 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 TNFRSF12AQ9NP84 129 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 IFT57Q9NWB7 429 aa9.06□□□□□ -0.96
PTPN12-202ENST00000407343 MYO1BO43795 1136 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 POU3F3P20264 500 aaPredicted RBP9.05□□□□□ -0.96
PTPN12-202ENST00000407343 TACR1P25103 407 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 IGFALSP35858 605 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 PAK1Q13153 545 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 HABP4Q5JVS0 413 aaKnown RBP9.05□□□□□ -0.96
PTPN12-202ENST00000407343 CEP68Q76N32 757 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 LZTR1Q8N653 840 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 CLDND1Q9NY35 253 aa9.05□□□□□ -0.96
PTPN12-202ENST00000407343 C22orf46C9J442 243 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 PDE8AO60658 829 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 FUCA1P04066 466 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 GLI4P10075 376 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 MYCLP1P12525 358 aaPredicted RBP9.04□□□□□ -0.96
PTPN12-202ENST00000407343 NAT1P18440 290 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 STAT3P40763 770 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 SNX17Q15036 470 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 ZCCHC8Q6NZY4 707 aaKnown RBP9.04□□□□□ -0.96
PTPN12-202ENST00000407343 KRT26Q7Z3Y9 468 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 FILIP1Q7Z7B0 1213 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 RIOX2Q8IUF8 465 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 TMEM169Q96HH4 297 aa9.04□□□□□ -0.96
PTPN12-202ENST00000407343 CRTAC1Q9NQ79 661 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms