RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 EYA3Q99504 573 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 LACRTQ9GZZ8 138 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MTMR4Q9NYA4 1195 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 TRIM10Q9UDY6 481 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 NENFQ9UMX5 172 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 RTCBQ9Y3I0 505 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 SCN9AQ15858 1988 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CTAGE15A4D2H0 777 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 SYF2O95926 243 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 CTAGE8P0CG41 777 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 FCER1AP12319 257 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 UBA7P41226 1012 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 KLK7P49862 253 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 AMPD3Q01432 767 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 LRRC63Q05C16 580 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 VWA3BQ502W6 1294 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 HGSNATQ68CP4 663 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 HEATR3Q7Z4Q2 680 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CTAGE6Q86UF2 777 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CREG2Q8IUH2 290 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CTAGE4Q8IX94 777 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 TXLNBQ8N3L3 684 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 HAS1Q92839 578 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 RRP36Q96EU6 259 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 MMS19Q96T76 1030 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 TSGA10Q9BZW7 698 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MKNK2Q9HBH9 465 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 SWAP70Q9UH65 585 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 ADAM21Q9UKJ8 722 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CCDC66A2RUB6 948 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 LRRIQ3A6PVS8 624 aaPredicted RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 USP17L5A8MUK1 530 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 BTNL10A8MVZ5 291 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 GNPATO15228 680 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 SLC37A4O43826 429 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CCNT1O60563 726 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 NOL4O94818 638 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 ZBTB48P10074 688 aaPredicted RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 MMP14P50281 582 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 KCNQ4P56696 695 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 KCNMA1Q12791 1236 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 ECM1Q16610 540 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 FAM98CQ17RN3 349 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 KIF4BQ2VIQ3 1234 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CSGALNACT2Q8N6G5 542 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 TBCKQ8TEA7 893 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 AENQ8WTP8 325 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 TBC1D22AQ8WUA7 517 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 PIGSQ96S52 555 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 GBP3Q9H0R5 595 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 SH2D4AQ9H788 454 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 ZCCHC17Q9NP64 241 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 ARHGAP20Q9P2F6 1191 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 POLLQ9UGP5 575 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 PUF60Q9UHX1 559 aaKnown RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 SSU72P8A0A1W2PR75 194 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 PDE2AO00408 941 aaPredicted RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 EPHB6O15197 1021 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 ERLIN1O75477 346 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 BBOX1O75936 387 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MCCD1P59942 119 aaPredicted RBP4.31□□□□□ -1.72
RTN4-209ENST00000405240 PDE4DQ08499 809 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CASP8Q14790 479 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MAN2A1Q16706 1144 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 NCAPH2Q6IBW4 605 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MOXD1Q6UVY6 613 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 BICDL1Q6ZP65 573 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 TMC4Q7Z404 712 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 FAM71BQ8TC56 605 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MKL1Q969V6 931 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 TRIM47Q96LD4 638 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MRIQ9BWK5 157 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 EHD4Q9H223 541 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 JMJD4Q9H9V9 463 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MED4Q9NPJ6 270 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 CALCOCO1Q9P1Z2 691 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 MAPK8IP1Q9UQF2 711 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 SAR1BQ9Y6B6 198 aa4.31□□□□□ -1.72
RTN4-209ENST00000405240 PNMA6FA0A0J9YX94 578 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 SHOX2O60902 331 aaPredicted RBP4.3□□□□□ -1.72
RTN4-209ENST00000405240 GOLGA8HP0CJ92 632 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 MCM3P25205 808 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 CYLC1P35663 651 aaPredicted RBP4.3□□□□□ -1.72
RTN4-209ENST00000405240 TECP42680 631 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 NAPAP54920 295 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 HNRNPH2P55795 449 aaKnown RBP4.3□□□□□ -1.72
RTN4-209ENST00000405240 SLC20A2Q08357 652 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 EMC10Q5UCC4 262 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 USP17L2Q6R6M4 530 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
RTN4-209ENST00000405240 SV2BQ7L1I2 683 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 SLF2Q8IX21 1173 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 AMOTL1Q8IY63 956 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 TBC1D16Q8TBP0 767 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 JAKMIP2Q96AA8 810 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 SH3GL2Q99962 352 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 LRRC27Q9C0I9 530 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 KCTD10Q9H3F6 313 aa4.3□□□□□ -1.72
RTN4-209ENST00000405240 KCNMB3Q9NPA1 279 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms