RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
PARVB-203ENST00000404989 HOOK2Q96ED9 719 aa18.29■□□□□ 0.52
PARVB-203ENST00000404989 NUDT12Q9BQG2 462 aa18.29■□□□□ 0.52
PARVB-203ENST00000404989 KIAA1683Q9H0B3 1180 aa18.29■□□□□ 0.52
PARVB-203ENST00000404989 KCNMB3Q9NPA1 279 aa18.29■□□□□ 0.52
PARVB-203ENST00000404989 HOXA13P31271 388 aaPredicted RBP18.28■□□□□ 0.52
PARVB-203ENST00000404989 GSDMDP57764 484 aa18.28■□□□□ 0.52
PARVB-203ENST00000404989 AMPD3Q01432 767 aa18.28■□□□□ 0.52
PARVB-203ENST00000404989 APOBEC3FQ8IUX4 373 aaKnown RBP18.28■□□□□ 0.52
PARVB-203ENST00000404989 POTEMA6NI47 508 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 Q4G0T1 1027 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 ZNF658Q5TYW1 1059 aaPredicted RBP18.27■□□□□ 0.52
PARVB-203ENST00000404989 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 FEZ1Q99689 392 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 BLOC1S4Q9NUP1 217 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 NFE2L3Q9Y4A8 694 aa18.27■□□□□ 0.52
PARVB-203ENST00000404989 POLR2AP24928 1970 aaKnown RBP18.27■□□□□ 0.51
PARVB-203ENST00000404989 WDR46O15213 610 aaKnown RBP18.26■□□□□ 0.51
PARVB-203ENST00000404989 MARCH6O60337 910 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 CYP3A4P08684 503 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 CIITAP33076 1130 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 DGKZQ13574 1117 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 KCNB1Q14721 858 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 DCAF15Q66K64 600 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 LPAR1Q92633 364 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 LENG9Q96B70 501 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 C7orf25Q9BPX7 421 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 STK17AQ9UEE5 414 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 ZNF536O15090 1300 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 PHIPQ8WWQ0 1821 aa18.26■□□□□ 0.51
PARVB-203ENST00000404989 SPDYE3A6NKU9 549 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 SERPINC1P01008 464 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
PARVB-203ENST00000404989 ECM1Q16610 540 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 KMT5BQ4FZB7 885 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 SPATA1Q5VX52 437 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 LDHDQ86WU2 507 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 NAP1L5Q96NT1 182 aaPredicted RBP18.25■□□□□ 0.51
PARVB-203ENST00000404989 LRRC27Q9C0I9 530 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 SAMSN1Q9NSI8 373 aaKnown RBP18.25■□□□□ 0.51
PARVB-203ENST00000404989 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 PYCARDQ9ULZ3 195 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 PCDHA12Q9UN75 941 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 MRPL11Q9Y3B7 192 aaKnown RBP18.25■□□□□ 0.51
PARVB-203ENST00000404989 FAM86B1E9PN63 330 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 FAM86B2P0C5J1 330 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 STX17P56962 302 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 UBASH3AP57075 661 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 KRT79Q5XKE5 535 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 SCYL3Q8IZE3 742 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 CACTINQ8WUQ7 758 aaKnown RBP18.25■□□□□ 0.51
PARVB-203ENST00000404989 CDK5RAP3Q96JB5 506 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 WDR18Q9BV38 432 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 GGA3Q9NZ52 723 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 GDAQ9Y2T3 454 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 STK24Q9Y6E0 443 aa18.25■□□□□ 0.51
PARVB-203ENST00000404989 ABCB11O95342 1321 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 PARP14Q460N5 1801 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 RHOBTB3O94955 611 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
PARVB-203ENST00000404989 PPP1R2P41236 205 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 LRMPQ12912 555 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 ARID5BQ14865 1188 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 HYIQ5T013 277 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 KLHL10Q6JEL2 608 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.24■□□□□ 0.51
PARVB-203ENST00000404989 SLFN12Q8IYM2 578 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 PRPF38AQ8NAV1 312 aaKnown RBP18.24■□□□□ 0.51
PARVB-203ENST00000404989 SNX29Q8TEQ0 813 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 ZKSCAN4Q969J2 545 aaPredicted RBP18.24■□□□□ 0.51
PARVB-203ENST00000404989 AGBL1Q96MI9 1066 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 INTS13Q9NVM9 706 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 FZD1Q9UP38 647 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 SSC5DA1L4H1 1573 aa18.24■□□□□ 0.51
PARVB-203ENST00000404989 GCOM1H8Y6P7 765 aaPredicted RBP18.23■□□□□ 0.51
PARVB-203ENST00000404989 TBX3O15119 743 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 NRDCO43847 1150 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 DDNO94850 711 aaPredicted RBP18.23■□□□□ 0.51
PARVB-203ENST00000404989 CFBP00751 764 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 ICAM1P05362 532 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 POLR2MP0CAP2 368 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 PTPRAP18433 802 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 PRCPP42785 496 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 SPIRE1Q08AE8 756 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 MCM6Q14566 821 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 PRR16Q569H4 304 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
PARVB-203ENST00000404989 KCNK18Q7Z418 384 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 FCHSD1Q86WN1 690 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 RAD54LQ92698 747 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 SYT17Q9BSW7 474 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 EHMT1Q9H9B1 1298 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 CTNND2Q9UQB3 1225 aa18.23■□□□□ 0.51
PARVB-203ENST00000404989 PPP2R3BQ9Y5P8 575 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms