RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 MMGT1Q8N4V1 131 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 C4orf32Q8N8J7 132 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 CASKIN2Q8WXE0 1202 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 CABS1Q96KC9 395 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 PLAAQ9Y263 795 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 ANO9A1A5B4 782 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 HGSO14964 777 aaPredicted RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 CPP00450 1065 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 CCNE1P24864 410 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 KCNQ4P56696 695 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 CCDC170Q8IYT3 715 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 TRIM9Q9C026 710 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 TCP11L1Q9NUJ3 509 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 MROH5Q6ZUA9 1318 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 GOLGA6L7A0A1B0GV03 622 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 SCP2P22307 547 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 PFKFB3Q16875 520 aaPredicted RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 KLHDC7AQ5VTJ3 777 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 KIAA0895Q8NCT3 520 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 YY1AP1Q9H869 796 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 RBM28Q9NW13 759 aaKnown RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 KLRC1P26715 233 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 POLR2FP61218 127 aaKnown RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 RAPGEF1Q13905 1077 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 NLRP14Q86W24 1093 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 POTEDQ86YR6 584 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 FNBP4Q8N3X1 1017 aaPredicted RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 MARCH10Q8NA82 808 aaPredicted RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 UHMK1Q8TAS1 419 aaKnown RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 ZNF384Q8TF68 577 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 UBLCP1Q8WVY7 318 aaPredicted RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 RIOK1Q9BRS2 568 aaKnown RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 DCDC2CA8MYV0 355 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 KCNK3O14649 394 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 TCP1P17987 556 aaKnown RBP10.58□□□□□ -0.72
SMC1B-202ENST00000404354 PRDX5P30044 214 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 CFAP221Q4G0U5 840 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 B4GALNT4Q76KP1 1039 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 IFT20Q8IY31 132 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 GIMAP7Q8NHV1 300 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 NOX5Q96PH1 765 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 LRRC4CQ9HCJ2 640 aa10.58□□□□□ -0.72
SMC1B-202ENST00000404354 TMCO5BA8MYB1 307 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 OPLAHO14841 1288 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 RAD51CO43502 376 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PPP1R37O75864 691 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 RHOBTB3O94955 611 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 ATP6V1AP38606 617 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 QPCTQ16769 361 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 VWA3BQ502W6 1294 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PNMA1Q8ND90 353 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 MYCBPAPQ8TBZ2 947 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 MDM1Q8TC05 714 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 NUP58Q9BVL2 599 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PCDHA6Q9UN73 950 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PLAGL2Q9UPG8 496 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PCDHA8Q9Y5H6 950 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PHF20L1A8MW92 1017 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 CEP104O60308 925 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 EMBQ6PCB8 327 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC13Q8IYE1 715 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC47Q96A33 483 aaKnown RBP10.57□□□□□ -0.72
SMC1B-202ENST00000404354 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 DDX47Q9H0S4 455 aaKnown RBP10.57□□□□□ -0.72
SMC1B-202ENST00000404354 DPH5Q9H2P9 285 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 HAUS2Q9NVX0 235 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
SMC1B-202ENST00000404354 GGT7Q9UJ14 662 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 NIP7Q9Y221 180 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMC1B-202ENST00000404354 ATRNO75882 1429 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 POTEMA6NI47 508 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 FLT3P36888 993 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 FNTAP49354 379 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 CDR1P51861 262 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PTGISQ16647 500 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC40Q4G0X9 1142 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 ACSBG1Q96GR2 724 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 EPN3Q9H201 632 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 KBTBD4Q9NVX7 518 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 PCDHA4Q9UN74 947 aa10.57□□□□□ -0.72
SMC1B-202ENST00000404354 MYH6P13533 1939 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 TLDC2A0PJX2 215 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 TRAF5O00463 557 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 COPB2P35606 906 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 USP8P40818 1118 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 NAPAP54920 295 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 NBPF9Q3BBW0 867 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 FAM133AQ8N9E0 248 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 TSGA10Q9BZW7 698 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 UBA5Q9GZZ9 404 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms