RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 GPKOWQ92917 476 aaPredicted RBP eCLIP26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 IRX2Q9BZI1 471 aaPredicted RBP26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 MRPL44Q9H9J2 332 aaKnown RBP26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 ZNF112Q9UJU3 913 aa26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 PCDHA5Q9Y5H7 936 aa26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 IQCA1LA6NCM1 817 aa26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 CTNND1O60716 968 aaKnown RBP26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 MCM6Q14566 821 aa26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 PTPAQ15257 358 aa26.4■■□□□ 1.82
TRIOBP-203ENST00000403663 RESP18Q5W5W9 173 aa26.39■■□□□ 1.82
TRIOBP-203ENST00000403663 GMCL1P1Q8NEA9 526 aa26.39■■□□□ 1.82
TRIOBP-203ENST00000403663 WASF1Q92558 559 aa26.39■■□□□ 1.82
TRIOBP-203ENST00000403663 SPZ1Q9BXG8 430 aa26.39■■□□□ 1.82
TRIOBP-203ENST00000403663 RAB21Q9UL25 225 aa26.39■■□□□ 1.82
TRIOBP-203ENST00000403663 TMX2Q9Y320 296 aa26.39■■□□□ 1.82
TRIOBP-203ENST00000403663 OTOFQ9HC10 1997 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 IVLP07476 585 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 SLC1A4P43007 532 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 DGKZQ13574 1117 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 LONRF3Q496Y0 759 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 HDXQ7Z353 690 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 MSL3Q8N5Y2 521 aaKnown RBP26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 JMYQ8N9B5 988 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 KLRG1Q96E93 195 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 ARHGEF10LQ9HCE6 1279 aa26.39■■□□□ 1.81
TRIOBP-203ENST00000403663 SCG2P13521 617 aa26.38■■□□□ 1.81
TRIOBP-203ENST00000403663 PFKFB3Q16875 520 aaPredicted RBP26.38■■□□□ 1.81
TRIOBP-203ENST00000403663 ADAMTS3O15072 1205 aa26.38■■□□□ 1.81
TRIOBP-203ENST00000403663 ZC3H15Q8WU90 426 aaKnown RBP26.38■■□□□ 1.81
TRIOBP-203ENST00000403663 CLIC6Q96NY7 704 aa26.38■■□□□ 1.81
TRIOBP-203ENST00000403663 PIGSQ96S52 555 aa26.38■■□□□ 1.81
TRIOBP-203ENST00000403663 USP2O75604 605 aaPredicted RBP26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 ZNF18P17022 549 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 MTF1Q14872 753 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 SUPT20HL1Q3ZLR7 823 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 TYW1BQ6NUM6 668 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 MSANTD4Q8NCY6 345 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 PNKPQ96T60 521 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 LZTS2Q9BRK4 669 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 RIOX1Q9H6W3 641 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 PHIPQ8WWQ0 1821 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 RPS6KA5O75582 802 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 CNNM3Q8NE01 707 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 RRAGCQ9HB90 399 aa26.37■■□□□ 1.81
TRIOBP-203ENST00000403663 PAPPA2Q9BXP8 1791 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 TRIM29Q14134 588 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 ADGRF4Q8IZF3 695 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 OXER1Q8TDS5 423 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 DCAF4Q8WV16 495 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 CDCA5Q96FF9 252 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 ZFP91Q96JP5 570 aaPredicted RBP26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 PUF60Q9UHX1 559 aaKnown RBP26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 L1RE1Q9UN81 338 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 N4BP1O75113 896 aaKnown RBP26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 MMP1P03956 469 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 CCDC175P0C221 793 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 FMR1Q06787 632 aaKnown RBP eCLIP26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 SCYL3Q8IZE3 742 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 RGS22Q8NE09 1264 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 HOOK2Q96ED9 719 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 JMJD4Q9H9V9 463 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 NFE2L3Q9Y4A8 694 aa26.36■■□□□ 1.81
TRIOBP-203ENST00000403663 POTEB2H3BUK9 544 aa26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 GPATCH4Q5T3I0 446 aaKnown RBP26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 WWC2Q6AWC2 1192 aa26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 MOB2Q70IA6 237 aa26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 CEP112Q8N8E3 955 aa26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 GMCL1Q96IK5 515 aa26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 CDC23Q9UJX2 597 aa26.35■■□□□ 1.81
TRIOBP-203ENST00000403663 BTBD18B2RXH4 712 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 USP17L10C9JJH3 530 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 NPY5RQ15761 445 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 ZNF526Q8TF50 670 aaPredicted RBP26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 KCNH3Q9ULD8 1083 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 FOXN1O15353 648 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 MDM2Q00987 491 aaPredicted RBP26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 NR5A1Q13285 461 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 MAP1SQ66K74 1059 aaPredicted RBP26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 PHF20Q9BVI0 1012 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 ABCB6Q9NP58 842 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 LZTFL1Q9NQ48 299 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 CLEC11AQ9Y240 323 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 FAN1Q9Y2M0 1017 aa26.34■■□□□ 1.81
TRIOBP-203ENST00000403663 SOWAHDA6NJG2 315 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 EIF3JO75822 258 aaKnown RBP26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 FOXR1Q6PIV2 292 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 HEATR3Q7Z4Q2 680 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 PNMA8AQ86V59 439 aaPredicted RBP26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 DIS3L2Q8IYB7 885 aaKnown RBP26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 VCPKMTQ9H867 229 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 SUGCTQ9HAC7 445 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 SNAP25P60880 206 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 FAM83BQ5T0W9 1011 aa26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.33■■□□□ 1.81
TRIOBP-203ENST00000403663 ERLIN1O75477 346 aa26.32■■□□□ 1.8
TRIOBP-203ENST00000403663 BMP3P12645 472 aa26.32■■□□□ 1.8
TRIOBP-203ENST00000403663 PTPRAP18433 802 aa26.32■■□□□ 1.8
TRIOBP-203ENST00000403663 SMARCA1P28370 1054 aa26.32■■□□□ 1.8
TRIOBP-203ENST00000403663 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms