RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 RAD21O60216 631 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 TADA3O75528 432 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 DNM2P50570 870 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 ARHGAP29Q52LW3 1261 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 KRT79Q5XKE5 535 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 STYK1Q6J9G0 422 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 SNX29Q8TEQ0 813 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 HAS1Q92839 578 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 SLC39A2Q9NP94 309 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 DDX41Q9UJV9 622 aaKnown RBP18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 SIPA1L1O43166 1804 aa18.96■□□□□ 0.63
DNMT3A-205ENST00000402667 PVALEFA0A1B0GWK0 134 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 B4DLN1 442 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 H2AFXP16104 143 aaPredicted RBP18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 SLC1A4P43007 532 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 UNC13DQ70J99 1090 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 RAD54LQ92698 747 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 ATF5Q9Y2D1 282 aaPredicted RBP18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 EFCAB8A8MWE9 144 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 KIF5CO60282 957 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 QRICH1Q2TAL8 776 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 SLFN13Q68D06 897 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 DYMQ7RTS9 669 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 SIAH1Q8IUQ4 282 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 OR8K1Q8NGG5 319 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 DCAF4Q8WV16 495 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 SEMA6BQ9H3T3 888 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 OGFRQ9NZT2 677 aa18.95■□□□□ 0.62
DNMT3A-205ENST00000402667 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 TMEM119Q4V9L6 283 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 TATDN1Q6P1N9 297 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 KCNK18Q7Z418 384 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 FAM114A1Q8IWE2 563 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 CNOT6LQ96LI5 555 aaKnown RBP18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 CHP1Q99653 195 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 CAPN11Q9UMQ6 739 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 LUC7L2Q9Y383 392 aaKnown RBP18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 SLX4Q8IY92 1834 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L15C9J2P7 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L13C9JLJ4 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L11C9JVI0 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L18D6R9N7 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L22D6RA61 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L17D6RBQ6 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L19D6RCP7 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L20D6RJB6 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 GCFC2P16383 781 aaKnown RBP18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L24Q0WX57 530 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 SEPT2Q15019 361 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 CENPPQ6IPU0 288 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 USP17L6PQ6QN14 398 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 GJA10Q969M2 543 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 SERPINA10Q9UK55 444 aa18.94■□□□□ 0.62
DNMT3A-205ENST00000402667 CHRNA5P30532 468 aa18.93■□□□□ 0.62
DNMT3A-205ENST00000402667 ECM1Q16610 540 aa18.93■□□□□ 0.62
DNMT3A-205ENST00000402667 DNAJC7Q99615 494 aa18.93■□□□□ 0.62
DNMT3A-205ENST00000402667 TRIM34Q9BYJ4 488 aa18.93■□□□□ 0.62
DNMT3A-205ENST00000402667 PCDHA1Q9Y5I3 950 aa18.93■□□□□ 0.62
DNMT3A-205ENST00000402667 MARCH6O60337 910 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 PPP2R3AQ06190 1150 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 TBC1D8BQ0IIM8 1120 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 ZNF569Q5MCW4 686 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 SLF1Q9BQI6 1058 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 GLT8D2Q9H1C3 349 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 PCDHA12Q9UN75 941 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 ABL1P00519 1130 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 MTIF2P46199 727 aaKnown RBP18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 CDC37Q16543 378 aaPredicted RBP18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 AOC3Q16853 763 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 DDX12PQ92771 950 aa18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 EPN1Q9Y6I3 576 aaPredicted RBP18.92■□□□□ 0.62
DNMT3A-205ENST00000402667 ICA1Q05084 483 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 MIIPQ5JXC2 388 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 TMEM179Q6ZVK1 233 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 NOC4LQ9BVI4 516 aaKnown RBP18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 LRRC27Q9C0I9 530 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 ZNF446Q9NWS9 450 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 RASSF10A6NK89 507 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 IDEP14735 1019 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 ARHGAP25P42331 645 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 NAP1L4Q99733 375 aaKnown RBP18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 TTYH3Q9C0H2 523 aa18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
DNMT3A-205ENST00000402667 F5H6K3 240 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 NKRFO15226 690 aaKnown RBP eCLIP18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 NDUFA10O95299 355 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 GDF11O95390 407 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 KLRC3Q07444 240 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 WDR59Q6PJI9 974 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 GUF1Q8N442 669 aaKnown RBP18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 C7orf43Q8WVR3 580 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 NUP58Q9BVL2 599 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 AGPAT5Q9NUQ2 364 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 ZNF646O15015 1829 aaPredicted RBP18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 KLK7P49862 253 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 USP11P51784 963 aa18.9■□□□□ 0.62
DNMT3A-205ENST00000402667 CLCN6P51797 869 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms