RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ADAMTS1Q9UHI8 967 aa10.16□□□□□ -0.78
HPS4-203ENST00000402105 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 KLRF2D3W0D1 207 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 PALMO75781 387 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 PRPF4BQ13523 1007 aaKnown RBP10.15□□□□□ -0.78
HPS4-203ENST00000402105 TTMPQ5BVD1 217 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 NAA35Q5VZE5 725 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 TBC1D5Q92609 795 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 TAF4BQ92750 862 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.78
HPS4-203ENST00000402105 A0A1W2PQC6 194 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 KCNK3O14649 394 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 EIF3HO15372 352 aaKnown RBP eCLIP10.15□□□□□ -0.788e-6■□□□□ 10.6
HPS4-203ENST00000402105 OR52Z1P0C646 297 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 CRKLP46109 303 aaKnown RBP10.15□□□□□ -0.78
HPS4-203ENST00000402105 AMPD3Q01432 767 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 KIAA0753Q2KHM9 967 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 CFAP221Q4G0U5 840 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 VWA3BQ502W6 1294 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 TCERG1LQ5VWI1 586 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 CCDC170Q8IYT3 715 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 UBLCP1Q8WVY7 318 aaPredicted RBP10.15□□□□□ -0.78
HPS4-203ENST00000402105 MTMR8Q96EF0 704 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 TSGA10Q9BZW7 698 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 SEMA6BQ9H3T3 888 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 GOPCQ9HD26 462 aa10.15□□□□□ -0.78
HPS4-203ENST00000402105 SEC63Q9UGP8 760 aaKnown RBP10.15□□□□□ -0.78
HPS4-203ENST00000402105 KLRC4O43908 158 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 CEP104O60308 925 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 ADAMTS2O95450 1211 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 AARSP49588 968 aaKnown RBP eCLIP10.15□□□□□ -0.79
HPS4-203ENST00000402105 BRINP3Q76B58 766 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 SLC51AQ86UW1 340 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 POTEDQ86YR6 584 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 IFT20Q8IY31 132 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 TBCKQ8TEA7 893 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 DHTKD1Q96HY7 919 aaPredicted RBP10.15□□□□□ -0.79
HPS4-203ENST00000402105 FAM84BQ96KN1 310 aaPredicted RBP10.15□□□□□ -0.79
HPS4-203ENST00000402105 SH2D4AQ9H788 454 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 ANKIB1Q9P2G1 1089 aa10.15□□□□□ -0.79
HPS4-203ENST00000402105 TARSL2A2RTX5 802 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 GOLGA8KD6RF30 607 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 HNRNPH1P31943 449 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 RDXP35241 583 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 TRAPPC10P48553 1259 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 EPHB4P54760 987 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 CNNM4Q6P4Q7 775 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 MMS22LQ6ZRQ5 1243 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 ZNF34Q8IZ26 560 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 FAM133AQ8N9E0 248 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 COA7Q96BR5 231 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 LSM14BQ9BX40 385 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 RHOBTB3O94955 611 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 TCP1P17987 556 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 HIBADHP31937 336 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 ARL6IP4Q66PJ3 421 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 SNX29Q8TEQ0 813 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 GOLGA6L7A0A1B0GV03 622 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 TLDC2A0PJX2 215 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 ACTN3Q08043 901 aaPredicted RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 NONOQ15233 471 aaKnown RBP eCLIP10.14□□□□□ -0.79
HPS4-203ENST00000402105 HAUS3Q68CZ6 603 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 SAMD1Q6SPF0 538 aaPredicted RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 ZNF384Q8TF68 577 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 AENQ8WTP8 325 aaKnown RBP10.14□□□□□ -0.79
HPS4-203ENST00000402105 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
HPS4-203ENST00000402105 HGSO14964 777 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 IL6STP40189 918 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 MIIPQ5JXC2 388 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 PIGSQ96S52 555 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CCDC113Q9H0I3 377 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CD248Q9HCU0 757 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 SLIT3O75094 1523 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 ANO9A1A5B4 782 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 RPS6KA5O75582 802 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 TMOD1P28289 359 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CDR1P51861 262 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 NKX1-1Q15270 411 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 SLC9C1Q4G0N8 1177 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 TXNRD3Q86VQ6 643 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 C4orf32Q8N8J7 132 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 NSUN4Q96CB9 384 aaKnown RBP10.13□□□□□ -0.79
HPS4-203ENST00000402105 CCDC114Q96M63 670 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 TSG101Q99816 390 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 DPH5Q9H2P9 285 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CCDC87Q9NVE4 849 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 MINPP1Q9UNW1 487 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 FRMD3A2A2Y4 597 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 MYMKA6NI61 221 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 CYTH3O43739 400 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 NR1D1P20393 614 aa10.13□□□□□ -0.79
HPS4-203ENST00000402105 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms