RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 TRIM47Q96LD4 638 aa17.63■□□□□ 0.41
CDC42-203ENST00000400259 HERC5Q9UII4 1024 aaKnown RBP17.63■□□□□ 0.41
CDC42-203ENST00000400259 POTEMA6NI47 508 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 LGALS16A8MUM7 142 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 NDUFB10O96000 172 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 TPM1P09493 284 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 HYIQ5T013 277 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 RBM26Q5T8P6 1007 aaKnown RBP17.62■□□□□ 0.41
CDC42-203ENST00000400259 RSBN1LQ6PCB5 846 aaPredicted RBP17.62■□□□□ 0.41
CDC42-203ENST00000400259 BTNL9Q6UXG8 535 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 UNC13DQ70J99 1090 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 RAD54LQ92698 747 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 CDK5RAP3Q96JB5 506 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 DUSP9Q99956 384 aaKnown RBP17.62■□□□□ 0.41
CDC42-203ENST00000400259 LRRC27Q9C0I9 530 aa17.62■□□□□ 0.41
CDC42-203ENST00000400259 A0A1W2PQC6 194 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 GDF11O95390 407 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 CASP14P31944 242 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 STK4Q13043 487 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 ERO1AQ96HE7 468 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 GMLQ99445 158 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 COL4A5P29400 1685 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 MYMKA6NI61 221 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 SLU7O95391 586 aaKnown RBP17.61■□□□□ 0.41
CDC42-203ENST00000400259 VIL1P09327 827 aaKnown RBP17.61■□□□□ 0.41
CDC42-203ENST00000400259 MMP14P50281 582 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 FXR1P51114 621 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDC42-203ENST00000400259 ZNF507Q8TCN5 953 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 CRYGNQ8WXF5 182 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 AMNQ9BXJ7 453 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 SRRTQ9BXP5 876 aaKnown RBP17.61■□□□□ 0.41
CDC42-203ENST00000400259 ANO3Q9BYT9 981 aa17.61■□□□□ 0.41
CDC42-203ENST00000400259 MEIS2O14770 477 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 GH2P01242 217 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 JAG1P78504 1218 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 MCM6Q14566 821 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 KIAA0895Q8NCT3 520 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 KCNMB3Q9NPA1 279 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 TMOD2Q9NZR1 351 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
CDC42-203ENST00000400259 ZNF215Q9UL58 517 aaPredicted RBP17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 EHHADHQ08426 723 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 RRP1BQ14684 758 aaKnown RBP17.6■□□□□ 0.41
CDC42-203ENST00000400259 SYDE2Q5VT97 1194 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 NUDT12Q9BQG2 462 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 MAGEC2Q9UBF1 373 aaPredicted RBP17.6■□□□□ 0.41
CDC42-203ENST00000400259 DNAI1Q9UI46 699 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
CDC42-203ENST00000400259 SOWAHDA6NJG2 315 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 CCDC175P0C221 793 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 FCER1AP12319 257 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 BMP3P12645 472 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 UBXN1Q04323 297 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 CENPPQ6IPU0 288 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 FOXR2Q6PJQ5 311 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 RAD9BQ6WBX8 426 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 TEX2Q8IWB9 1127 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 CSGALNACT2Q8N6G5 542 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 MB21D1Q8N884 522 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 RAD21O60216 631 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 ANKRD40Q6AI12 368 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 FAM151AQ8WW52 585 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 ABHD10Q9NUJ1 306 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDC42-203ENST00000400259 ADGRG1Q9Y653 693 aa17.59■□□□□ 0.41
CDC42-203ENST00000400259 V9GYY5 206 aaPredicted RBP17.59■□□□□ 0.41
CDC42-203ENST00000400259 FANCGO15287 622 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 DNM2P50570 870 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 PSMD2Q13200 908 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 MTF1Q14872 753 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 FBXO11Q86XK2 927 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 NT5C3AQ9H0P0 336 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 HDAC9Q9UKV0 1011 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 SMCHD1A6NHR9 2005 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 FOSP01100 380 aaPredicted RBP17.58■□□□□ 0.4
CDC42-203ENST00000400259 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 KCNK18Q7Z418 384 aa17.58■□□□□ 0.4
CDC42-203ENST00000400259 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
CDC42-203ENST00000400259 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms