RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 STAT6P42226 847 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 ELOA2Q8IYF1 753 aaPredicted RBP18.9■□□□□ 0.62
PTPRA-205ENST00000399903 KRT12Q99456 494 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 SPEF2Q9C093 1822 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 MYH10P35580 1976 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 MAGEB6P1A0A0J9YX57 407 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 RPS8P62241 208 aaKnown RBP18.9■□□□□ 0.62
PTPRA-205ENST00000399903 SPRED3Q2MJR0 410 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 PREPLQ4J6C6 727 aaPredicted RBP18.9■□□□□ 0.62
PTPRA-205ENST00000399903 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 TTC38Q5R3I4 469 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 CYB5D1Q6P9G0 228 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 EMBQ6PCB8 327 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 PIK3AP1Q6ZUJ8 805 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 NLRP3Q96P20 1036 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 MMRN2Q9H8L6 949 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 UTRNP46939 3433 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 SMTNP53814 917 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 CSGALNACT2Q8N6G5 542 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 TRIM58Q8NG06 486 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 ALS2CR12Q96Q35 445 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 TUBGCP2Q9BSJ2 902 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.62
PTPRA-205ENST00000399903 PACSIN2Q9UNF0 486 aaPredicted RBP18.89■□□□□ 0.62
PTPRA-205ENST00000399903 LGALS16A8MUM7 142 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 MDH1P40925 334 aaKnown RBP18.89■□□□□ 0.61
PTPRA-205ENST00000399903 SKOR1P84550 965 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 BIRC2Q13490 618 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 FANCBQ8NB91 859 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 CAPN11Q9UMQ6 739 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.89■□□□□ 0.61
PTPRA-205ENST00000399903 NMT2O60551 498 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 FECHP22830 423 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 TDRD12Q587J7 1177 aaKnown RBP18.89■□□□□ 0.61
PTPRA-205ENST00000399903 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
PTPRA-205ENST00000399903 IFT20Q8IY31 132 aa18.89■□□□□ 0.61
PTPRA-205ENST00000399903 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
PTPRA-205ENST00000399903 A0A1B0GUA9 196 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 GCFC2P16383 781 aaKnown RBP18.88■□□□□ 0.61
PTPRA-205ENST00000399903 DDR1Q08345 913 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 CYFIP2Q96F07 1278 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 THOC1Q96FV9 657 aaKnown RBP18.88■□□□□ 0.61
PTPRA-205ENST00000399903 TRIM6Q9C030 488 aaPredicted RBP18.88■□□□□ 0.61
PTPRA-205ENST00000399903 PLAAQ9Y263 795 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 FAM170AA1A519 330 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 CYP2D6P10635 497 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 RASSF7Q02833 373 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 FAM196AQ6ZSG2 479 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 MMGT1Q8N4V1 131 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 DNAJC7Q99615 494 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 TPX2Q9ULW0 747 aaKnown RBP18.88■□□□□ 0.61
PTPRA-205ENST00000399903 HYOU1Q9Y4L1 999 aa18.88■□□□□ 0.61
PTPRA-205ENST00000399903 COL1A1P02452 1464 aaPredicted RBP18.88■□□□□ 0.61
PTPRA-205ENST00000399903 CCDC189A1A4V9 331 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 GCKP35557 465 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 CPLX4Q7Z7G2 160 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 MTRQ99707 1265 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 NOC4LQ9BVI4 516 aaKnown RBP18.87■□□□□ 0.61
PTPRA-205ENST00000399903 EXOC1Q9NV70 894 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 BCL9LQ86UU0 1499 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 LTBP4Q8N2S1 1624 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 ANKRD36CQ5JPF3 1778 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 PP2D1A8MPX8 630 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 FTCDO95954 541 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 PPP1R7Q15435 360 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 FAM47AQ5JRC9 791 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 ZNF658Q5TYW1 1059 aaPredicted RBP18.87■□□□□ 0.61
PTPRA-205ENST00000399903 MSL1Q68DK7 614 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 SH3RF1Q7Z6J0 888 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 BSDC1Q9NW68 430 aaPredicted RBP18.87■□□□□ 0.61
PTPRA-205ENST00000399903 ANO9A1A5B4 782 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 H7C1D1 291 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 ZNF263O14978 683 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 VPS72Q15906 364 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 CCDC178Q5BJE1 867 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 SPATS2Q86XZ4 545 aaKnown RBP18.87■□□□□ 0.61
PTPRA-205ENST00000399903 TEX11Q8IYF3 940 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 FNBP4Q8N3X1 1017 aaPredicted RBP18.87■□□□□ 0.61
PTPRA-205ENST00000399903 TCP11Q8WWU5 503 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 ANKIB1Q9P2G1 1089 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 PCDHA13Q9Y5I0 950 aa18.87■□□□□ 0.61
PTPRA-205ENST00000399903 LRRC10BA6NIK2 292 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 RFC4P35249 363 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 EIF4A3P38919 411 aaKnown RBP18.86■□□□□ 0.61
PTPRA-205ENST00000399903 MAGEA1P43355 309 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 ARID5AQ03989 594 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 SGMS1Q86VZ5 419 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 USP17L12C9JPN9 530 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 USP17L21D6R901 530 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 DNM1LO00429 736 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 GTPBP6O43824 516 aaPredicted RBP18.86■□□□□ 0.61
PTPRA-205ENST00000399903 CLTAP09496 248 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 NFIXQ14938 502 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 HIBCHQ6NVY1 386 aaPredicted RBP18.86■□□□□ 0.61
PTPRA-205ENST00000399903 CLEC4GQ6UXB4 293 aa18.86■□□□□ 0.61
PTPRA-205ENST00000399903 PSMA7O14818 248 aa18.85■□□□□ 0.61
PTPRA-205ENST00000399903 BUB1BO60566 1050 aaPredicted RBP18.85■□□□□ 0.61
PTPRA-205ENST00000399903 PAK2Q13177 524 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms