RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
COL25A1-201ENST00000399126 IGSF22Q8N9C0 903 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 MED15Q96RN5 788 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 CCSER1Q9C0I3 900 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 PPP4R3AQ6IN85 833 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 APOBEC3FQ8IUX4 373 aaKnown RBP17.05■□□□□ 0.32
COL25A1-201ENST00000399126 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 NUDT12Q9BQG2 462 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
COL25A1-201ENST00000399126 SPP2Q13103 211 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
COL25A1-201ENST00000399126 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
COL25A1-201ENST00000399126 CFBP00751 764 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 EMILIN3Q9NT22 766 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 FEM1BQ9UK73 627 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 LOC102724159A0A0B4J2E5 919 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 SMC2O95347 1197 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 PWP2Q15269 919 aaKnown RBP17.04■□□□□ 0.32
COL25A1-201ENST00000399126 SARM1Q6SZW1 724 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 KIAA1683Q9H0B3 1180 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 LRWD1Q9UFC0 647 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL25A1-201ENST00000399126 COBLO75128 1261 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
COL25A1-201ENST00000399126 C9orf131Q5VYM1 1079 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 AK8Q96MA6 479 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
COL25A1-201ENST00000399126 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
COL25A1-201ENST00000399126 VCAM1P19320 739 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
COL25A1-201ENST00000399126 UBXN2AP68543 259 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 MYL5Q02045 173 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 AP3B2Q13367 1082 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 DCAF15Q66K64 600 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 ZSCAN30Q86W11 494 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 SCYL3Q8IZE3 742 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 FANCLQ9NW38 375 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 ZNF536O15090 1300 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 UQCRHLA0A096LP55 91 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 FAM86B1E9PN63 330 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
COL25A1-201ENST00000399126 UQCRHP07919 91 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 FAM86B2P0C5J1 330 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 PTPRAP18433 802 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 FAM160B2Q86V87 743 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 CCDC34Q96HJ3 373 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
COL25A1-201ENST00000399126 PHIPQ8WWQ0 1821 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 IKBKBO14920 756 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 GRB10Q13322 594 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
COL25A1-201ENST00000399126 PRR16Q569H4 304 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 DRC7Q8IY82 874 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 TRIML1Q8N9V2 468 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 PNMA5Q96PV4 448 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 GSDMAQ96QA5 445 aa17.02■□□□□ 0.32
COL25A1-201ENST00000399126 ADM5C9JUS6 153 aa17.02■□□□□ 0.31
COL25A1-201ENST00000399126 WDR46O15213 610 aaKnown RBP17.02■□□□□ 0.31
COL25A1-201ENST00000399126 PLA2G6O60733 806 aa17.02■□□□□ 0.31
COL25A1-201ENST00000399126 ECM1Q16610 540 aa17.02■□□□□ 0.31
COL25A1-201ENST00000399126 CPXCR1Q8N123 301 aa17.02■□□□□ 0.31
COL25A1-201ENST00000399126 LENG9Q96B70 501 aa17.02■□□□□ 0.31
COL25A1-201ENST00000399126 KLRG1Q96E93 195 aa17.02■□□□□ 0.31
COL25A1-201ENST00000399126 PYM1Q9BRP8 204 aaKnown RBP17.02■□□□□ 0.31
COL25A1-201ENST00000399126 PTGS1P23219 599 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 SREBF1P36956 1147 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 STAT3P40763 770 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 USP11P51784 963 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 STX17P56962 302 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 SLC30A10Q6XR72 485 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 MLKLQ8NB16 471 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 SLF1Q9BQI6 1058 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 KBTBD4Q9NVX7 518 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
COL25A1-201ENST00000399126 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 MARCH6O60337 910 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 FLOT1O75955 427 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
COL25A1-201ENST00000399126 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
COL25A1-201ENST00000399126 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 TMEM266Q2M3C6 531 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 KCNK18Q7Z418 384 aa17.01■□□□□ 0.31
COL25A1-201ENST00000399126 LPAR1Q92633 364 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms