RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 ZRANB2O95218 330 aaKnown RBP eCLIP11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 GNAQP50148 359 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 SYDE2Q5VT97 1194 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 CHURC1Q8WUH1 139 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 SLF1Q9BQI6 1058 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 LZTS2Q9BRK4 669 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 CALCOCO1Q9P1Z2 691 aa11.81□□□□□ -0.52
SFTPA1-201ENST00000398636 CNMDO75829 334 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 FLOT1O75955 427 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 CYP2C8P10632 490 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 NDUFA8P51970 172 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 PTPN21Q16825 1174 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 ADALQ6DHV7 355 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 ATG4CQ96DT6 458 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 RANBP17Q9H2T7 1088 aaKnown RBP11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 SLC38A10Q9HBR0 1119 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 HOXC10Q9NYD6 342 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 ZNF536O15090 1300 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 CCDC196A0A1B0GTZ2 297 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 KIF2AO00139 706 aaPredicted RBP11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 VWA5AO00534 786 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 HERVK_113P62684 666 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 GOLGA8FQ08AF8 430 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 GOLGA8DPQ0D2H9 430 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 OTUD7BQ6GQQ9 843 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 NEK11Q8NG66 645 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 KIFC2Q96AC6 838 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 IMPACTQ9P2X3 320 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 ORC3Q9UBD5 711 aaPredicted RBP11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 RBPJLQ9UBG7 517 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 DNAI1Q9UI46 699 aa11.8□□□□□ -0.52
SFTPA1-201ENST00000398636 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 PEX10O60683 326 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 PPP1R11O60927 126 aaPredicted RBP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 OSBPP22059 807 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 NCAPHQ15003 741 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 PKN1Q16512 942 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 ISM2Q6H9L7 571 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 CCDC82Q8N4S0 544 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 PHKBQ93100 1093 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 SDF4Q9BRK5 362 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 BAZ2BQ9UIF8 2168 aaKnown RBP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 SASH3O75995 380 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 ATP1A3P13637 1013 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 SFPQP23246 707 aaKnown RBP eCLIP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 SNAP25P60880 206 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 FBXO18Q8NFZ0 1043 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 PIGSQ96S52 555 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 CFHR5Q9BXR6 569 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 TXNRD2Q9NNW7 524 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 ZNF214Q9UL59 606 aaPredicted RBP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 COL11A1P12107 1806 aaPredicted RBP11.79□□□□□ -0.52
SFTPA1-201ENST00000398636 ATP2A1O14983 1001 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 CDK11BP21127 795 aaKnown RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 IRX3P78415 501 aaPredicted RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 TMEM132BQ14DG7 1078 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 CCDC150Q8NCX0 1101 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 NAT10Q9H0A0 1025 aaKnown RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 HSD3B7Q9H2F3 369 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 CLIC4Q9Y696 253 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 hCG_1642624A0A1W2PR95 340 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 CA12O43570 354 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 FDX1P10109 184 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 ETF1P62495 437 aaKnown RBP11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 STK38Q15208 465 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 QRICH1Q2TAL8 776 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 Q3C1V9 767 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 C17orf99Q6UX52 265 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 KCNG4Q8TDN1 519 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 CARD6Q9BX69 1037 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
SFTPA1-201ENST00000398636 STK36Q9NRP7 1315 aa11.77□□□□□ -0.52
SFTPA1-201ENST00000398636 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.53
SFTPA1-201ENST00000398636 ZBTB5O15062 677 aa11.77□□□□□ -0.53
SFTPA1-201ENST00000398636 TADA3O75528 432 aa11.77□□□□□ -0.53
SFTPA1-201ENST00000398636 YEATS4O95619 227 aa11.77□□□□□ -0.53
SFTPA1-201ENST00000398636 BCRP11274 1271 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms