RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 IWS1Q96ST2 819 aa12.67□□□□□ -0.38
PCDHGA8-201ENST00000398604 PCIF1Q9H4Z3 704 aa12.67□□□□□ -0.38
PCDHGA8-201ENST00000398604 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA8-201ENST00000398604 RPN1P04843 607 aaKnown RBP12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 SETDB1Q15047 1291 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 CCT6BQ92526 530 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 TIGD1Q96MW7 591 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 C1orf112Q9NSG2 853 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 FAM184BQ9ULE4 1060 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 BMP3P12645 472 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 ITIH3Q06033 890 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 UBE2SQ16763 222 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 LONRF2Q1L5Z9 754 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 KRT71Q3SY84 523 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 HACE1Q8IYU2 909 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 MGARPQ8TDB4 240 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 FAM149B1Q96BN6 582 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 ZNF653Q96CK0 615 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 VPS37BQ9H9H4 285 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 KDM3AQ9Y4C1 1321 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 MECOMQ03112 1051 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 CFAP221Q4G0U5 840 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 CCDC89Q8N998 374 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 ZNF577Q9BSK1 485 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 DISC1Q9NRI5 854 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 NRBP1Q9UHY1 535 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 IFT20Q8IY31 132 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 C10orf67Q8IYJ2 551 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 HESX1Q9UBX0 185 aa12.66□□□□□ -0.38
PCDHGA8-201ENST00000398604 GIPC1O14908 333 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 KIF22Q14807 665 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 KAZNQ674X7 775 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 GBP6Q6ZN66 633 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SLC7A3Q8WY07 619 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 DPH5Q9H2P9 285 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 AMFRQ9UKV5 643 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 LRRN2O75325 713 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 TUBBP07437 444 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 CYP2D6P10635 497 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 FAM193BQ96PV7 902 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 AKT3Q9Y243 479 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 MED23Q9ULK4 1368 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 STK10O94804 968 aaKnown RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 INTS8Q75QN2 995 aaKnown RBP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SLFN12Q8IYM2 578 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 C7orf31Q8N865 590 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 CEP170P1Q96L14 293 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
PCDHGA8-201ENST00000398604 CIAO1O76071 339 aa12.65□□□□□ -0.39
PCDHGA8-201ENST00000398604 DDAH1O94760 285 aa12.65□□□□□ -0.39
PCDHGA8-201ENST00000398604 ANKRD42Q8N9B4 389 aa12.65□□□□□ -0.39
PCDHGA8-201ENST00000398604 DDX23Q9BUQ8 820 aaKnown RBP12.65□□□□□ -0.39
PCDHGA8-201ENST00000398604 NRBP2Q9NSY0 501 aa12.65□□□□□ -0.39
PCDHGA8-201ENST00000398604 STK24Q9Y6E0 443 aa12.65□□□□□ -0.39
PCDHGA8-201ENST00000398604 FOSP01100 380 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 GH2P01242 217 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 TNNC2P02585 160 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 IVLP07476 585 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 NR2F2P24468 414 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 ERCC6LQ2NKX8 1250 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 PI4K2BQ8TCG2 481 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 NSMCE1Q8WV22 266 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 IGKV5-2P06315 115 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 H2AFZP0C0S5 128 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 SAT1P21673 171 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 TUBB4BP68371 445 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 SLC39A14Q15043 492 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 H2AFVQ71UI9 128 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 PHLDB2Q86SQ0 1253 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 DPCR1Q3MIW9 517 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 SDCCAG8Q86SQ7 713 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 LARP4BQ92615 738 aaKnown RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 PI4KBQ9UBF8 816 aa12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 NXF1Q9UBU9 619 aaKnown RBP12.64□□□□□ -0.39
PCDHGA8-201ENST00000398604 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms