RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PPIP5K2O43314 1243 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 RBM6P78332 1123 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 ASIC1P78348 528 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 ZNF790Q6PG37 636 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 TRIM58Q8NG06 486 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 CCDC138Q96M89 665 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 EPAS1Q99814 870 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 MAF1Q9H063 256 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 LUC7L2Q9Y383 392 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 USP6P35125 1406 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 A0A1B0GW55 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 TTLL8A6PVC2 850 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 ELL2O00472 640 aaPredicted RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 AKR1B10O60218 316 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 GAS7O60861 476 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4L2P0CJ85 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4L3P0CJ86 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4L4P0CJ87 422 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4L5P0CJ88 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4L6P0CJ89 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4L7P0CJ90 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 NCKAP1LP55160 1127 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 NR1H3Q13133 447 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 UBE4AQ14139 1066 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 ASIC2Q16515 512 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 EAPPQ56P03 285 aaPredicted RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 TMEM132EQ6IEE7 984 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 MAATS1Q7Z4T9 603 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 ARHGEF25Q86VW2 580 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 THEM5Q8N1Q8 247 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 SAMD3Q8N6K7 520 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 CCDC63Q8NA47 563 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 MRPS27Q92552 414 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 PARK7Q99497 189 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 MTA3Q9BTC8 594 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 SELENONQ9NZV5 590 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 CALCOCO1Q9P1Z2 691 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DUX4Q9UBX2 424 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 IPPQ9Y573 584 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PLCH1Q4KWH8 1693 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 IRS4O14654 1257 aaPredicted RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 MAFGO15525 162 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 RHOBTB3O94955 611 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 HIBADHP31937 336 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 PHKA2P46019 1235 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 OXCT1P55809 520 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 MXRA7P84157 204 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PDE1BQ01064 536 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 WNK4Q96J92 1243 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 BCL2L12Q9HB09 334 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DDX21Q9NR30 783 aaKnown RBP eCLIP2.97□□□□□ -1.93
CHD9-202ENST00000398510 NRXN1Q9ULB1 1477 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 C5P01031 1676 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 TNPO2O14787 897 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 CHEK2O96017 543 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 POMCP01189 267 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 JAK1P23458 1154 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 GCKP35557 465 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 IL6STP40189 918 aaPredicted RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 HDAC4P56524 1084 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 RRS1Q15050 365 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 GIMAP6Q6P9H5 292 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 CCDC129Q6ZRS4 1044 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 CNPY3Q9BT09 278 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 METTL22Q9BUU2 404 aaPredicted RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 WDR11Q9BZH6 1224 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PPANQ9NQ55 473 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 SLC38A7Q9NVC3 462 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PKD1L3Q7Z443 1732 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 VAMP4O75379 141 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 ERN1O75460 977 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 TTLL4Q14679 1199 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 MAPK6Q16659 721 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 NBPF20Q3BBV1 942 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 GLG1Q92896 1179 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 TADA1Q96BN2 335 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 FOPNLQ96NB1 174 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 TEKT3Q9BXF9 490 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 TMEM206Q9H813 350 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 KANSL2Q9H9L4 492 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 DDX56Q9NY93 547 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 NSFL1CQ9UNZ2 370 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 ZNFX1Q9P2E3 1918 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 UBXN1Q04323 297 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 AP3B2Q13367 1082 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 CAPRIN1Q14444 709 aaKnown RBP2.97□□□□□ -1.93
CHD9-202ENST00000398510 SLC9C1Q4G0N8 1177 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PDXDC2PQ6P474 469 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 STX19Q8N4C7 294 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 C1QTNF7Q9BXJ2 289 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 SEZ6LQ9BYH1 1024 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 PPCSQ9HAB8 311 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 NRBP2Q9NSY0 501 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 ZMYM5Q9UJ78 669 aa2.97□□□□□ -1.93
CHD9-202ENST00000398510 GOLGA8RI6L899 631 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 SLC2A3P11169 496 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 RALBP11234 206 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 KRT9P35527 623 aa2.96□□□□□ -1.93
CHD9-202ENST00000398510 FAM160A1Q05DH4 1040 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms