RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 TLK2Q86UE8 772 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 PIBF1Q8WXW3 757 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 RMDN3Q96TC7 470 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 ZSWIM6Q9HCJ5 1215 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 PXMP2Q9NR77 195 aa19.33■□□□□ 0.68
APTR-201ENST00000398043 NID2Q14112 1375 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 CNTNAP5Q8WYK1 1306 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 ZBTB43O43298 467 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 C6orf222P0C671 652 aaPredicted RBP19.32■□□□□ 0.68
APTR-201ENST00000398043 HOXA13P31271 388 aaPredicted RBP19.32■□□□□ 0.68
APTR-201ENST00000398043 EVCP57679 992 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 RTP1P59025 263 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 Q6ZUG5 572 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 WDR11Q9BZH6 1224 aa19.32■□□□□ 0.68
APTR-201ENST00000398043 FRMPD4Q14CM0 1322 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 B4DLN1 442 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 ARIH2O95376 493 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 ASGR1P07306 291 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 CASTP20810 708 aaKnown RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 PSMA5P28066 241 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 CDC27P30260 824 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 MRPL12P52815 198 aaKnown RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 GNASQ5JWF2 1037 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 CCDC62Q6P9F0 684 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 SYNE3Q6ZMZ3 975 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 PCSK9Q8NBP7 692 aaKnown RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 MPHOSPH6Q99547 160 aaKnown RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 PDCD2LQ9BRP1 358 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 TM6SF1Q9BZW5 370 aa19.31■□□□□ 0.68
APTR-201ENST00000398043 RBM28Q9NW13 759 aaKnown RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 ZMYND8Q9ULU4 1186 aaPredicted RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 COLQQ9Y215 455 aaPredicted RBP19.31■□□□□ 0.68
APTR-201ENST00000398043 GCOM1H8Y6P7 765 aaPredicted RBP19.3■□□□□ 0.68
APTR-201ENST00000398043 MEIS2O14770 477 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 DYNC1LI2O43237 492 aaPredicted RBP19.3■□□□□ 0.68
APTR-201ENST00000398043 NR3C2P08235 984 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 POLR2MP0CAP2 368 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 EIF2AK2P19525 551 aaKnown RBP19.3■□□□□ 0.68
APTR-201ENST00000398043 BEX3Q00994 111 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 APOBRQ0VD83 1088 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 RTN1Q16799 776 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 TRIM60Q495X7 471 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 ARHGEF16Q5VV41 709 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 RUFY3Q7L099 469 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 CCDC82Q8N4S0 544 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 SCFD2Q8WU76 684 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 BRF1Q92994 677 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 SPC25Q9HBM1 224 aa19.3■□□□□ 0.68
APTR-201ENST00000398043 ELP1O95163 1332 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 hCG_1642624A0A1W2PR95 340 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 RGS20O76081 388 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 SYN1P17600 705 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 TOB2Q14106 344 aaPredicted RBP19.29■□□□□ 0.68
APTR-201ENST00000398043 PGM5Q15124 567 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 STXBP2Q15833 593 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 FSCN1Q16658 493 aaKnown RBP19.29■□□□□ 0.68
APTR-201ENST00000398043 NOL8Q76FK4 1167 aaKnown RBP19.29■□□□□ 0.68
APTR-201ENST00000398043 IL31RAQ8NI17 732 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 IL17RAQ96F46 866 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 GDF15Q99988 308 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 PCDH10Q9P2E7 1040 aa19.29■□□□□ 0.68
APTR-201ENST00000398043 SEC63Q9UGP8 760 aaKnown RBP19.29■□□□□ 0.68
APTR-201ENST00000398043 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 GOLGA8BA8MQT2 603 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 NKRFO15226 690 aaKnown RBP eCLIP19.28■□□□□ 0.68
APTR-201ENST00000398043 CDK7P50613 346 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 PPP2R5BQ15173 497 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 CHRDL2Q6WN34 429 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 AP5M1Q9H0R1 490 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 STARD7Q9NQZ5 370 aa19.28■□□□□ 0.68
APTR-201ENST00000398043 EIF3JO75822 258 aaKnown RBP19.27■□□□□ 0.68
APTR-201ENST00000398043 TXNP10599 105 aaKnown RBP19.27■□□□□ 0.68
APTR-201ENST00000398043 ADD1P35611 737 aaKnown RBP19.27■□□□□ 0.68
APTR-201ENST00000398043 TLE2Q04725 743 aa19.27■□□□□ 0.68
APTR-201ENST00000398043 HABP4Q5JVS0 413 aaKnown RBP19.27■□□□□ 0.68
APTR-201ENST00000398043 USP17L6PQ6QN14 398 aa19.27■□□□□ 0.68
APTR-201ENST00000398043 ANKRD33Q7Z3H0 272 aa19.27■□□□□ 0.68
APTR-201ENST00000398043 COPS5Q92905 334 aa19.27■□□□□ 0.68
APTR-201ENST00000398043 RBM27Q9P2N5 1060 aaKnown RBP19.27■□□□□ 0.68
APTR-201ENST00000398043 ATP11BQ9Y2G3 1177 aa19.27■□□□□ 0.68
APTR-201ENST00000398043 TRIP12Q14669 1992 aaPredicted RBP19.26■□□□□ 0.67
APTR-201ENST00000398043 TTLL4Q14679 1199 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 WWC2Q6AWC2 1192 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 TYW1BQ6NUM6 668 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 CXCL17Q6UXB2 119 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 SEPT14Q6ZU15 432 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 FCHSD1Q86WN1 690 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 SLC43A3Q8NBI5 491 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 GPKOWQ92917 476 aaPredicted RBP eCLIP19.26■□□□□ 0.67
APTR-201ENST00000398043 GLT1D1Q96MS3 346 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 TOX2Q96NM4 488 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 PDLIM7Q9NR12 457 aa19.26■□□□□ 0.67
APTR-201ENST00000398043 V9GY48 417 aaPredicted RBP19.26■□□□□ 0.67
APTR-201ENST00000398043 GRIN2DO15399 1336 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 A6NJR5 290 aa19.25■□□□□ 0.67
APTR-201ENST00000398043 SEC24BO95487 1268 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms