RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 WDR46O15213 610 aaKnown RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 RNF113AO15541 343 aaKnown RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 MSCO60682 206 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 SLC25A27O95847 323 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 CYP2E1P05181 493 aaPredicted RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 POLR3DP05423 398 aaPredicted RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 RLBP1P12271 317 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 MX1P20591 662 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 SMARCA1P28370 1054 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 MAPK4P31152 587 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 RBM5P52756 815 aaKnown RBP eCLIP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 FAM160A1Q05DH4 1040 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 PPP2R5BQ15173 497 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 NBPF9Q3BBW0 867 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 MCTP2Q6DN12 878 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 GMCL1P1Q8NEA9 526 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 EAF2Q96CJ1 260 aaPredicted RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 TTC14Q96N46 770 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 DSCC1Q9BVC3 393 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.44□□□□□ -1.74e-7■■■■■ 61.5
UBE3A-202ENST00000397954 RAI14Q9P0K7 980 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 NYAP2Q9P242 653 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 FAM8A1Q9UBU6 413 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 SERPINB13Q9UIV8 391 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 PPT2Q9UMR5 302 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 AFG3L2Q9Y4W6 797 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 EML1O00423 815 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 PDE6AP16499 860 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 RGS3P49796 1198 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 PDE4BQ07343 736 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 ZMYM1Q5SVZ6 1142 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 FBXL19Q6PCT2 694 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 NBPF11Q86T75 865 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 FAM160B2Q86V87 743 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF280CQ8ND82 737 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 ANKS1AQ92625 1134 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 IFT43Q96FT9 208 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 NEUROD6Q96NK8 337 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 NBPF3Q9H094 633 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 RNF186Q9NXI6 227 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 TMOD4Q9NZQ9 345 aa4.44□□□□□ -1.7
UBE3A-202ENST00000397954 ANGEL1Q9UNK9 670 aaKnown RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 A0A1W2PPC1 479 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 B4DLN1 442 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ADM5C9JUS6 153 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 TCERG1O14776 1098 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 STRNO43815 780 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 TLR2O60603 784 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 HOXB1P14653 301 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 POU3F3P20264 500 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 KLRK1P26718 216 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ST13P50502 369 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 MRPL12P52815 198 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 FCGRTP55899 365 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 NKX3-2P78367 333 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 KIF23Q02241 960 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 IFFO2Q5TF58 517 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 LAPTM4BQ86VI4 370 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ZDHHC1Q8WTX9 485 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 MPHOSPH6Q99547 160 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 DBNDD2Q9BQY9 259 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 BCO2Q9BYV7 579 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 CHST12Q9NRB3 414 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 FBXO40Q9UH90 709 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 HPS5Q9UPZ3 1129 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 hCG_1984214I3L0E3 225 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 SMAD7O15105 426 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 TNFRSF21O75509 655 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PTPRAP18433 802 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 CYP7A1P22680 504 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 EIF4A3P38919 411 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 CHAF1AQ13111 956 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 VGLL4Q14135 290 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 CASC1Q6TDU7 716 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 SIRT2Q8IXJ6 389 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 MAGEB6Q8N7X4 407 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF713Q8N859 430 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PI4K2BQ8TCG2 481 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF296Q8WUU4 475 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 DCAF4Q8WV16 495 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 OPTNQ96CV9 577 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 FRMD6Q96NE9 622 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PRR14Q9BWN1 585 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 MROH8Q9H579 483 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 TDRD3Q9H7E2 651 aaKnown RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 HOMER2Q9NSB8 354 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 TMEM260Q9NX78 707 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 TLR6Q9Y2C9 796 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 RABGAP1Q9Y3P9 1069 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 NID2Q14112 1375 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PLIN1O60240 522 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 BCRP11274 1271 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 PRDX5P30044 214 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 ADORA1P30542 326 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 GBP2P32456 591 aaPredicted RBP4.43□□□□□ -1.7
UBE3A-202ENST00000397954 SOX9P48436 509 aa4.43□□□□□ -1.7
UBE3A-202ENST00000397954 SMTNP53814 917 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms