RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SWAP70Q9UH65 585 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 PPP1R7Q15435 360 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 EDRF1Q3B7T1 1238 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 MOXD1Q6UVY6 613 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 PPP4R3CPQ6ZMV5 832 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 SLF2Q8IX21 1173 aa6.02□□□□□ -1.45
PTPRD-205ENST00000397611 GBP1P32455 592 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 GUCY2FP51841 1108 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SETDB1Q15047 1291 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 KCTD16Q68DU8 428 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 PPFIBP2Q8ND30 876 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 MMRN2Q9H8L6 949 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 ARMT1Q9H993 441 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 ABCB6Q9NP58 842 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 ZBTB12Q9Y330 459 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 CICQ96RK0 1608 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 ATXN2Q99700 1313 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TTC26A0AVF1 554 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TMEM232C9JQI7 657 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TEX33O43247 280 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 RPN1P04843 607 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SLC8A1P32418 973 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TBC1D8BQ0IIM8 1120 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 C4orf32Q8N8J7 132 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TBC1D22AQ8WUA7 517 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 P2RX5Q93086 422 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 KCNJ14Q9UNX9 436 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 CNTNAP4Q9C0A0 1308 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SHOX2O60902 331 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 GNA14O95837 355 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 FKBP3Q00688 224 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 MAN2A1Q16706 1144 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 C10orf76Q5T2E6 689 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 KLHL7Q8IXQ5 586 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SLC35F6Q8N357 371 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 C6orf50Q9HD87 102 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TAB2Q9NYJ8 693 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 PCDHA4Q9UN74 947 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 A0A0G2JLW4 131 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 PALM3A6NDB9 673 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 ZMYND10O75800 440 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SASH3O75995 380 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 MYCNP04198 464 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 NAALADL2Q58DX5 795 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 YTHDF3Q7Z739 585 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SRLQ86TD4 932 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 NSUN4Q96CB9 384 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 STMN4Q9H169 189 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 FAM114A2Q9NRY5 505 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 EXOC1Q9NV70 894 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 PLIN4Q96Q06 1357 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 CPP00450 1065 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 PDE6BP35913 854 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 EPHB4P54760 987 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 INTS8Q75QN2 995 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 LEMD3Q9Y2U8 911 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 KLRC4O43908 158 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 RBL2Q08999 1139 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 ZNF827Q17R98 1081 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 MB21D1Q8N884 522 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 IFT74Q96LB3 600 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 NCAPGQ9BPX3 1015 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 SUGT1Q9Y2Z0 365 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 HYOU1Q9Y4L1 999 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 BZW2Q9Y6E2 419 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 USP17L12C9JPN9 530 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 USP17L21D6R901 530 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 PARP1P09874 1014 aaKnown RBP6.01□□□□□ -1.45
PTPRD-205ENST00000397611 CHRNDQ07001 517 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 HLFQ16534 295 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TUBGCP2Q9BSJ2 902 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 TRIM7Q9C029 511 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 NT5C3AQ9H0P0 336 aa6.01□□□□□ -1.45
PTPRD-205ENST00000397611 M0R2N6 131 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 STAT6P42226 847 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 MARSP56192 900 aaKnown RBP6□□□□□ -1.45
PTPRD-205ENST00000397611 IFT88Q13099 833 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 TSNAXIP1Q2TAA8 658 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 CCNI2Q6ZMN8 369 aaPredicted RBP6□□□□□ -1.45
PTPRD-205ENST00000397611 TOGARAM2Q6ZUX3 1019 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 IFT20Q8IY31 132 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 EPSTI1Q96J88 318 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 RASAL2Q9UJF2 1139 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 OR52Z1P0C646 297 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 C12orf60Q5U649 245 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 CSGALNACT2Q8N6G5 542 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 CABLES1Q8TDN4 633 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 SELENOOQ9BVL4 669 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 SNX12Q9UMY4 172 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 PITPNM2Q9BZ72 1349 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 LOC102724428A0A0B4J2F2 783 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 CCDC188H7C350 402 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 SIK1P57059 783 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 SKOR1P84550 965 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 RBBP5Q15291 538 aaKnown RBP6□□□□□ -1.45
PTPRD-205ENST00000397611 TCERG1LQ5VWI1 586 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 SPATA24Q86W54 205 aa6□□□□□ -1.45
PTPRD-205ENST00000397611 PNMA1Q8ND90 353 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms