RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 FAM205AQ6ZU69 1335 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 A6NNZ2 444 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 PPP1R12AO14974 1030 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 EIF4A3P38919 411 aaKnown RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 CDK17Q00537 523 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 ITIH3Q06033 890 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 SF3A3Q12874 501 aaKnown RBP eCLIP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 NNTQ13423 1086 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 TUBB8Q3ZCM7 444 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 CEP85LQ5SZL2 805 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 MMRN2Q9H8L6 949 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 KRT14P02533 472 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 MYL1P05976 194 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 EPB41P11171 864 aaKnown RBP10.15□□□□□ -0.78
CAPN3-206ENST00000397163 PRLRP16471 622 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 MAGEA1P43355 309 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 DNA2P51530 1060 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 SEC24CP53992 1094 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 SKOR1P84550 965 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 GUCY1A3Q02108 690 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 NAA25Q14CX7 972 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 CFAP58Q5T655 872 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 CCDC43Q96MW1 224 aaKnown RBP10.15□□□□□ -0.78
CAPN3-206ENST00000397163 ZIM3Q96PE6 472 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 ERGIC2Q96RQ1 377 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 KLC4Q9NSK0 619 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 KBTBD4Q9NVX7 518 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 ARHGAP20Q9P2F6 1191 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 MYH6P13533 1939 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 CDC25CP30307 473 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 CCNHP51946 323 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-206ENST00000397163 STK4Q13043 487 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 INF2Q27J81 1249 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 MIIPQ5JXC2 388 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 IFT81Q8WYA0 676 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
CAPN3-206ENST00000397163 RIOK1Q9BRS2 568 aaKnown RBP10.15□□□□□ -0.78
CAPN3-206ENST00000397163 RBM12Q9NTZ6 932 aaKnown RBP10.15□□□□□ -0.78
CAPN3-206ENST00000397163 UBR2Q8IWV8 1755 aa10.15□□□□□ -0.79
CAPN3-206ENST00000397163 A0A1W2PQJ5 194 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 EME2A4GXA9 379 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 CHUKO15111 745 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 FCER1AP12319 257 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 KIF5BP33176 963 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 EVA1CP58658 441 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 IFT88Q13099 833 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 KCTD19Q17RG1 926 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 FIGNQ5HY92 759 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 ZNF572Q7Z3I7 529 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 CAVIN3Q969G5 261 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 CALR3Q96L12 384 aaKnown RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 PCDHA4Q9UN74 947 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 PLAGL2Q9UPG8 496 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 BACH1O14867 736 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 NKRFO15226 690 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 BUB1O43683 1085 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 PLCG1P19174 1290 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 EVX2Q03828 476 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 RRAGAQ7L523 313 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 IFT20Q8IY31 132 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 MS4A14Q96JA4 679 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 BRIP1Q9BX63 1249 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 TCP11L1Q9NUJ3 509 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 DDX20Q9UHI6 824 aaKnown RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 NFU1Q9UMS0 254 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 ESYT3A0FGR9 886 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 TSPY2A6NKD2 308 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 PCP11498 1178 aaKnown RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 GCFC2P16383 781 aaKnown RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 GYG1P46976 350 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 CHRNDQ07001 517 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 CABP7Q86V35 215 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 HPS3Q969F9 1004 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 RNPC3Q96LT9 517 aaKnown RBP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAPN3-206ENST00000397163 MTMR7Q9Y216 660 aa10.14□□□□□ -0.79
CAPN3-206ENST00000397163 OPLAHO14841 1288 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 EPHB6O15197 1021 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 CYP19A1P11511 503 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 CARSP49589 748 aaKnown RBP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 RASSF7Q02833 373 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 GUCY2DQ02846 1103 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 CCDC152Q4G0S7 254 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 CFAP221Q4G0U5 840 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 CCDC40Q4G0X9 1142 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 SUSD4Q5VX71 490 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 MICALCLQ6ZW33 695 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 CCDC13Q8IYE1 715 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 LRRC15Q8TF66 581 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 NOX5Q96PH1 765 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 TRIM9Q9C026 710 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 EPB41L5Q9HCM4 733 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 BCCIPQ9P287 314 aaKnown RBP eCLIP10.13□□□□□ -0.79
CAPN3-206ENST00000397163 C21orf2O43822 256 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 ZPR1O75312 459 aa10.13□□□□□ -0.79
CAPN3-206ENST00000397163 HEXIM1O94992 359 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms