RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 LCHNA4D1U4 455 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 WDR5P61964 334 aaKnown RBP17.69■□□□□ 0.42
SEC13-206ENST00000397102 CCDC96Q2M329 555 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 BTNL9Q6UXG8 535 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 CAGE1Q8TC20 777 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 AFAP1L1Q8TED9 768 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 GDPD5Q8WTR4 605 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
SEC13-206ENST00000397102 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
SEC13-206ENST00000397102 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
SEC13-206ENST00000397102 NMT2O60551 498 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 EDNRBP24530 442 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 CALML3P27482 149 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 NOVP48745 357 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 PDE4DQ08499 809 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 SLC30A10Q6XR72 485 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 COPS5Q92905 334 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 ZBED2Q9BTP6 218 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
SEC13-206ENST00000397102 MTMR7Q9Y216 660 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 MUC6Q6W4X9 2439 aa17.68■□□□□ 0.42
SEC13-206ENST00000397102 PRR33A8MZF0 331 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 SLC16A2P36021 539 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 PTGISQ16647 500 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 SYDE2Q5VT97 1194 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 CNKSR3Q6P9H4 555 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 RNF207Q6ZRF8 634 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 DNERQ8NFT8 737 aa17.67■□□□□ 0.42
SEC13-206ENST00000397102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.66■□□□□ 0.42
SEC13-206ENST00000397102 PARNO95453 639 aaKnown RBP17.66■□□□□ 0.42
SEC13-206ENST00000397102 TXNP10599 105 aaKnown RBP17.66■□□□□ 0.42
SEC13-206ENST00000397102 DEFB103AP81534 67 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 GPNMBQ14956 572 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 LEXMQ3ZCV2 418 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
SEC13-206ENST00000397102 SESTD1Q86VW0 696 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 FAM178BQ8IXR5 827 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 TGS1Q96RS0 853 aaKnown RBP17.66■□□□□ 0.42
SEC13-206ENST00000397102 CTAGE1Q96RT6 745 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 SUGCTQ9HAC7 445 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 PNMA2Q9UL42 364 aa17.66■□□□□ 0.42
SEC13-206ENST00000397102 PIEZO1Q92508 2521 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
SEC13-206ENST00000397102 GJB5O95377 273 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 CXCL10P02778 98 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 SELPP16109 830 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 ERVK-21P61565 698 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 RPS6P62753 249 aaKnown RBP17.65■□□□□ 0.42
SEC13-206ENST00000397102 CTDSPL2Q05D32 466 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 RBL2Q08999 1139 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 ZMYM1Q5SVZ6 1142 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 LRRC8DQ7L1W4 858 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 ALYREFQ86V81 257 aaKnown RBP17.65■□□□□ 0.42
SEC13-206ENST00000397102 GJD3Q8N144 294 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 RAD9AQ99638 391 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
SEC13-206ENST00000397102 ABHD14A-ACY1A0A1B0GW23 586 aa17.64■□□□□ 0.41
SEC13-206ENST00000397102 B4DLN1 442 aa17.64■□□□□ 0.41
SEC13-206ENST00000397102 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.41
SEC13-206ENST00000397102 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
SEC13-206ENST00000397102 GDF6Q6KF10 455 aaPredicted RBP17.64■□□□□ 0.41
SEC13-206ENST00000397102 DHX38Q92620 1227 aaKnown RBP17.64■□□□□ 0.41
SEC13-206ENST00000397102 MTUS1Q9ULD2 1270 aa17.64■□□□□ 0.41
SEC13-206ENST00000397102 KIAA1217Q5T5P2 1943 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 LINC01553A4QN01 128 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 FOXP2O15409 715 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 ORC4O43929 436 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 EFCAB14O75071 495 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 ARIH2O95376 493 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.63■□□□□ 0.41
SEC13-206ENST00000397102 FSD1Q9BTV5 496 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 GPCPD1Q9NPB8 672 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 ANAPC4Q9UJX5 808 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 FRMPD2Q68DX3 1309 aaPredicted RBP17.63■□□□□ 0.41
SEC13-206ENST00000397102 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 WDR19Q8NEZ3 1342 aa17.63■□□□□ 0.41
SEC13-206ENST00000397102 NBNO60934 754 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 MMP3P08254 477 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 TOP1P11387 765 aaKnown RBP17.62■□□□□ 0.41
SEC13-206ENST00000397102 KCNA5P22460 613 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 AFG1LQ8WV93 481 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 KAT2BQ92831 832 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 DCTPP1Q9H773 170 aa17.62■□□□□ 0.41
SEC13-206ENST00000397102 GH1P01241 217 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 FGRP09769 529 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 CKBP12277 381 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 ALADP13716 330 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 IL9P15248 144 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 SSTR3P32745 418 aaPredicted RBP17.61■□□□□ 0.41
SEC13-206ENST00000397102 TCTN1Q2MV58 587 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 CRBNQ96SW2 442 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 GTF2IRD1Q9UHL9 959 aa17.61■□□□□ 0.41
SEC13-206ENST00000397102 PDHBP11177 359 aa17.6■□□□□ 0.41
SEC13-206ENST00000397102 CASTP20810 708 aaKnown RBP17.6■□□□□ 0.41
SEC13-206ENST00000397102 ARHGAP1Q07960 439 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms