RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 PPP2R2CQ9Y2T4 447 aa6.74□□□□□ -1.33
RAPGEF4-203ENST00000397087 DOCK5Q9H7D0 1870 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 NUTM2BA6NNL0 878 aaPredicted RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 NUTM2EB1AL46 878 aaPredicted RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 SERPINC1P01008 464 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 CCDC175P0C221 793 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 BCRP11274 1271 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 MCM3P25205 808 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 MFSD14BQ5SR56 506 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 PDILTQ8N807 584 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 NUP133Q8WUM0 1156 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 RAD54LQ92698 747 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 TRIM9Q9C026 710 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 PI4KBQ9UBF8 816 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 RPTORQ8N122 1335 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 SREBF1P36956 1147 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 STAT6P42226 847 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 RRAGBQ5VZM2 374 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 XRRA1Q6P2D8 792 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 GPR161Q8N6U8 529 aaKnown RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 SLC17A8Q8NDX2 589 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 P2RX5Q93086 422 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 CALML4Q96GE6 196 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 MMTAG2Q9BU76 263 aaKnown RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 INCENPQ9NQS7 918 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 GJB4Q9NTQ9 266 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 RAB21Q9UL25 225 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 TARSL2A2RTX5 802 aaKnown RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 EIF3CLB5ME19 914 aaKnown RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 EIF3DO15371 548 aaKnown RBP eCLIP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 CYP2D6P10635 497 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 CD44P16070 742 aaKnown RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 ALCAMQ13740 583 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 PIK3AP1Q6ZUJ8 805 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 CABP7Q86V35 215 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 RTKN2Q8IZC4 609 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 MB21D1Q8N884 522 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 CEP112Q8N8E3 955 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 AGBL3Q8NEM8 1001 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 TGFBRAP1Q8WUH2 860 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.73□□□□□ -1.332e-6■■■■■ 40.7
RAPGEF4-203ENST00000397087 RABGGTAQ92696 567 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 GMLQ99445 158 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 EIF3CQ99613 913 aaKnown RBP6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 TFCP2L1Q9NZI6 479 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 TBC1D7Q9P0N9 293 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 SEL1LQ9UBV2 794 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 PGAP2Q9UHJ9 254 aa6.73□□□□□ -1.33
RAPGEF4-203ENST00000397087 SSU72P8A0A1W2PR75 194 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 EDIL3O43854 480 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 RFX1P22670 979 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 GRIN1Q05586 938 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 CEP95Q96GE4 821 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 EHMT1Q9H9B1 1298 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 JMJD4Q9H9V9 463 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 TUFT1Q9NNX1 390 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 RNF14Q9UBS8 474 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 PARP3Q9Y6F1 533 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 KRT31Q15323 416 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 CFAP100Q494V2 611 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 TYW1BQ6NUM6 668 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 CDC42EP5Q6NZY7 148 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 EPM2AIP1Q7L775 607 aaPredicted RBP6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 CCDC84Q86UT8 332 aaPredicted RBP6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 IRF2BP1Q8IU81 584 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 ZKSCAN3Q9BRR0 538 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 HAUS4Q9H6D7 363 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 SH2D4AQ9H788 454 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 ABHD10Q9NUJ1 306 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 DDX41Q9UJV9 622 aaKnown RBP6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 PCDHA2Q9Y5H9 948 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 ADGRG1Q9Y653 693 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 ZNF236Q9UL36 1845 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 SMCO2A6NFE2 343 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 KCNJ18B7U540 433 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 TADA3O75528 432 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 LYPLA2O95372 231 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 KRT83P78385 493 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 ZBED6P86452 979 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 GRB10Q13322 594 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 KCNJ12Q14500 433 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 BRD3Q15059 726 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 CCDC96Q2M329 555 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 B3GNT9Q6UX72 402 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 C12orf56Q8IXR9 622 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 CERS5Q8N5B7 392 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 NELFBQ8WX92 580 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 TMX4Q9H1E5 349 aaPredicted RBP6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 RANBP17Q9H2T7 1088 aaKnown RBP6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 ST6GALNAC4Q9H4F1 302 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 TSKSQ9UJT2 592 aa6.72□□□□□ -1.33
RAPGEF4-203ENST00000397087 USP17L3A6NCW0 530 aa6.71□□□□□ -1.33
RAPGEF4-203ENST00000397087 USP17L4A6NCW7 530 aa6.71□□□□□ -1.33
RAPGEF4-203ENST00000397087 SNAP23O00161 211 aa6.71□□□□□ -1.33
RAPGEF4-203ENST00000397087 VIL1P09327 827 aaKnown RBP6.71□□□□□ -1.33
RAPGEF4-203ENST00000397087 GAP43P17677 238 aa6.71□□□□□ -1.33
RAPGEF4-203ENST00000397087 NAPAP54920 295 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms