RNA–Protein interactions for RNA: ENST00000397035.7

ATP2A3-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-204ENST00000397035 LIMA1Q9UHB6 759 aaKnown RBP16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 RFX7Q2KHR2 1363 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 CDHR2Q9BYE9 1310 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 CPDO75976 1380 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 MAGOHP61326 146 aaKnown RBP16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 HLFQ16534 295 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 KRT25Q7Z3Z0 450 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 MAGOHBQ96A72 148 aaKnown RBP16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 NKIRAS1Q9NYS0 192 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 ASIC3Q9UHC3 531 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 SUFUQ9UMX1 484 aa16.63■□□□□ 0.25
ATP2A3-204ENST00000397035 GSG1L2A8MUP6 293 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 KLRF2D3W0D1 207 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 PPP1R37O75864 691 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 TMOD1P28289 359 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 SLC8A1P32418 973 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 CETN1Q12798 172 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 TBX2Q13207 712 aaPredicted RBP16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 MAN2A1Q16706 1144 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 ELAC2Q9BQ52 826 aaKnown RBP16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 SLC1A4P43007 532 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 SESN3P58005 492 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 SETDB1Q15047 1291 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 GSTA5Q7RTV2 222 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 IFT74Q96LB3 600 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 RNPC3Q96LT9 517 aaKnown RBP16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 HAUS2Q9NVX0 235 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 LSP1P33241 339 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 THOC1Q96FV9 657 aaKnown RBP16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 MLXIPLQ9NP71 852 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 AMFRQ9UKV5 643 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 RAB21Q9UL25 225 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 CAPN11Q9UMQ6 739 aa16.62■□□□□ 0.25
ATP2A3-204ENST00000397035 C6orf229H3BNL8 230 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 SLC20A2Q08357 652 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 MYO1EQ12965 1108 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 PTPN22Q9Y2R2 807 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 USP32Q8NFA0 1604 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 HDLBPQ00341 1268 aaKnown RBP16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 MAEAQ7L5Y9 396 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 GOLPH3Q9H4A6 298 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 KCND1Q9NSA2 647 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 NEO1Q92859 1461 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 TARSL2A2RTX5 802 aaKnown RBP16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 ADAM9Q13443 819 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 FAM26FQ5R3K3 315 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 CAPN12Q6ZSI9 719 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
ATP2A3-204ENST00000397035 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 H2AFZP0C0S5 128 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 CHRNDQ07001 517 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 H2AFVQ71UI9 128 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 NBPF5PQ86XG9 351 aaPredicted RBP16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 HMGB1P1B2RPK0 211 aaPredicted RBP16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 CHMP2AO43633 222 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 LDHCP07864 332 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 CYP2D6P10635 497 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 DNAJC17Q9NVM6 304 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 PLEKHG2Q9H7P9 1386 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 GMNCA6NCL1 334 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 PSMD14O00487 310 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 ADAMTS2O95450 1211 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 SEL1L2Q5TEA6 688 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 ATG3Q9NT62 314 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 ZBTB1Q9Y2K1 713 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 CAPN6Q9Y6Q1 641 aa16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 ARHGEF28Q8N1W1 1705 aaKnown RBP16.6■□□□□ 0.25
ATP2A3-204ENST00000397035 EPB41P11171 864 aaKnown RBP16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 WDR93Q6P2C0 686 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 GPBP1Q86WP2 473 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 DYNLL2Q96FJ2 89 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 PCDHA4Q9UN74 947 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 PIK3C2BO00750 1634 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 ZSCAN5CA6NGD5 496 aaPredicted RBP16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 FAM13AO94988 1023 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 CTNNA2P26232 953 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 HIBADHP31937 336 aaKnown RBP16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 PLCB3Q01970 1234 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 NLRP10Q86W26 655 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 ERMNQ8TAM6 284 aa16.59■□□□□ 0.25
ATP2A3-204ENST00000397035 ATP6V1G3Q96LB4 118 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms