RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 EPHB4P54760 987 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CTSWP56202 376 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 SIK1P57059 783 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CEP85LQ5SZL2 805 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ANKRD40Q6AI12 368 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 BANK1Q8NDB2 785 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CCDC114Q96M63 670 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 KRT12Q99456 494 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 MAP3K15Q6ZN16 1313 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ARFGEF2Q9Y6D5 1785 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 RASSF10A6NK89 507 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 MEFVO15553 781 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 HEXIM1O94992 359 aaKnown RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 SLC5A1P13866 664 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ZBED6P86452 979 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ALX1Q15699 326 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 HAUS3Q68CZ6 603 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 DTHD1Q6ZMT9 781 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 SRBD1Q8N5C6 995 aaKnown RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 SLC39A2Q9NP94 309 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 SUFUQ9UMX1 484 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 BRCA1P38398 1863 aaKnown RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 EPHB6O15197 1021 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 BMP15O95972 392 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CSF1RP07333 972 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CDR1P51861 262 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 KIF11P52732 1056 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 GFPT1Q06210 699 aaPredicted RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 PUM3Q15397 648 aaKnown RBP10.91□□□□□ -0.66
TRIM39-203ENST00000396547 NAA35Q5VZE5 725 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CACNA2D4Q7Z3S7 1137 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 CCDC155Q8N6L0 562 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ALS2CR12Q96Q35 445 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 SLC4A9Q96Q91 983 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 ASAP1Q9ULH1 1129 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 WTIPA6NIX2 430 aaPredicted RBP10.9□□□□□ -0.66
TRIM39-203ENST00000396547 PRPF3O43395 683 aaKnown RBP10.9□□□□□ -0.66
TRIM39-203ENST00000396547 SRGNP10124 158 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 NR1D1P20393 614 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 SCP2P22307 547 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
TRIM39-203ENST00000396547 ADGRA1Q86SQ6 560 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 ZNF473Q8WTR7 871 aaKnown RBP10.9□□□□□ -0.66
TRIM39-203ENST00000396547 LPIN2Q92539 896 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 SH3GL2Q99962 352 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIM39-203ENST00000396547 MTFR1LQ9H019 292 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 SALL4Q9UJQ4 1053 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 HYOU1Q9Y4L1 999 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 EEF1GP26641 437 aaKnown RBP10.9□□□□□ -0.66
TRIM39-203ENST00000396547 STK4Q13043 487 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 INF2Q27J81 1249 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 MMGT1Q8N4V1 131 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 UIMC1Q96RL1 719 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 CCT8L2Q96SF2 557 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 TMEM60Q9H2L4 133 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 KANSL2Q9H9L4 492 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 ARHGAP20Q9P2F6 1191 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 JAG2Q9Y219 1238 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 MYH10P35580 1976 aa10.9□□□□□ -0.66
TRIM39-203ENST00000396547 CCDC194A0A1B0GVG4 234 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 ZNF233A6NK53 670 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 NLRP10Q86W26 655 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 DNAAF5Q86Y56 855 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 DISC1Q9NRI5 854 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 ANO9A1A5B4 782 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 RPSAP08865 295 aaKnown RBP10.89□□□□□ -0.67
TRIM39-203ENST00000396547 TMOD1P28289 359 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 PTGER2P43116 358 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 EHHADHQ08426 723 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 SEC23AQ15436 765 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 DYMQ7RTS9 669 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 DUSP9Q99956 384 aaKnown RBP10.89□□□□□ -0.67
TRIM39-203ENST00000396547 PDS5AQ29RF7 1337 aaKnown RBP10.89□□□□□ -0.67
TRIM39-203ENST00000396547 A0A1W2PQC6 194 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 USP17L21D6R901 530 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 PDHBP11177 359 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 ITPK1Q13572 414 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 CCDC40Q4G0X9 1142 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 ALS2CLQ60I27 953 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 CCDC121Q6ZUS5 278 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 MICALCLQ6ZW33 695 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 NLRP14Q86W24 1093 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 DDX42Q86XP3 938 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRIM39-203ENST00000396547 IFT20Q8IY31 132 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 PRPF38AQ8NAV1 312 aaKnown RBP10.89□□□□□ -0.67
TRIM39-203ENST00000396547 LINC00116Q8NCU8 138 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 ANKRD36CQ5JPF3 1778 aa10.89□□□□□ -0.67
TRIM39-203ENST00000396547 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms