RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MFSD5Q6N075 450 aa21.3■■□□□ 1
FXN-203ENST00000396366 SEPT14Q6ZU15 432 aa21.3■■□□□ 1
FXN-203ENST00000396366 HOMER1Q86YM7 354 aa21.3■■□□□ 1
FXN-203ENST00000396366 PIGSQ96S52 555 aa21.3■■□□□ 1
FXN-203ENST00000396366 RMDN3Q96TC7 470 aa21.3■■□□□ 1
FXN-203ENST00000396366 MPHOSPH6Q99547 160 aaKnown RBP21.3■■□□□ 1
FXN-203ENST00000396366 ESYT1Q9BSJ8 1104 aa21.3■■□□□ 1
FXN-203ENST00000396366 UMODL1Q5DID0 1318 aa21.29■■□□□ 1
FXN-203ENST00000396366 ZBTB5O15062 677 aa21.29■■□□□ 1
FXN-203ENST00000396366 CYTH3O43739 400 aa21.29■■□□□ 1
FXN-203ENST00000396366 B4GALT4O60513 344 aa21.29■■□□□ 1
FXN-203ENST00000396366 CSF2RAP15509 400 aa21.29■■□□□ 1
FXN-203ENST00000396366 PURAQ00577 322 aaKnown RBP21.29■■□□□ 1
FXN-203ENST00000396366 PPP2R5BQ15173 497 aa21.29■■□□□ 1
FXN-203ENST00000396366 NSUN6Q8TEA1 469 aaKnown RBP21.29■■□□□ 1
FXN-203ENST00000396366 SCFD2Q8WU76 684 aa21.29■■□□□ 1
FXN-203ENST00000396366 RNPC3Q96LT9 517 aaKnown RBP21.29■■□□□ 1
FXN-203ENST00000396366 PCDHA1Q9Y5I3 950 aa21.29■■□□□ 1
FXN-203ENST00000396366 B4DLN1 442 aa21.28■■□□□ 1
FXN-203ENST00000396366 ACRP10323 421 aa21.28■■□□□ 1
FXN-203ENST00000396366 EIF2AK2P19525 551 aaKnown RBP21.28■■□□□ 1
FXN-203ENST00000396366 MRPL12P52815 198 aaKnown RBP21.28■■□□□ 1
FXN-203ENST00000396366 LY6KQ17RY6 165 aa21.28■■□□□ 1
FXN-203ENST00000396366 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.28■■□□□ 19e-6■■■■■ 27.7
FXN-203ENST00000396366 MAF1Q9H063 256 aa21.28■■□□□ 1
FXN-203ENST00000396366 RIOX1Q9H6W3 641 aa21.28■■□□□ 1
FXN-203ENST00000396366 HOXA13P31271 388 aaPredicted RBP21.27■■□□□ 1
FXN-203ENST00000396366 CPT1AP50416 773 aa21.27■■□□□ 1
FXN-203ENST00000396366 HSD17B4P51659 736 aa21.27■■□□□ 1
FXN-203ENST00000396366 SART3Q15020 963 aaKnown RBP21.27■■□□□ 1
FXN-203ENST00000396366 ARHGEF16Q5VV41 709 aa21.27■■□□□ 1
FXN-203ENST00000396366 CCDC62Q6P9F0 684 aa21.27■■□□□ 1
FXN-203ENST00000396366 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
FXN-203ENST00000396366 GUCD1Q96NT3 240 aa21.27■■□□□ 1
FXN-203ENST00000396366 MYL10Q9BUA6 226 aa21.27■■□□□ 1
FXN-203ENST00000396366 LY9Q9HBG7 655 aa21.27■■□□□ 1
FXN-203ENST00000396366 POLR3EQ9NVU0 708 aa21.27■■□□□ 1
FXN-203ENST00000396366 KIAA1217Q5T5P2 1943 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 A6NJR5 290 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 SLC27A2O14975 620 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 NKRFO15226 690 aaKnown RBP eCLIP21.26■□□□□ 0.99
FXN-203ENST00000396366 TTLL4Q14679 1199 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 STXBP2Q15833 593 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 FAM109BQ6ICB4 259 aaPredicted RBP21.26■□□□□ 0.99
FXN-203ENST00000396366 CENPQQ7L2Z9 268 aaPredicted RBP21.26■□□□□ 0.99
FXN-203ENST00000396366 CATIPQ7Z7H3 387 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 IWS1Q96ST2 819 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 ALDH8A1Q9H2A2 487 aaPredicted RBP21.26■□□□□ 0.99
FXN-203ENST00000396366 PXMP2Q9NR77 195 aa21.26■□□□□ 0.99
FXN-203ENST00000396366 TRMT13Q9NUP7 481 aaKnown RBP21.26■□□□□ 0.99
FXN-203ENST00000396366 PRC1O43663 620 aa21.25■□□□□ 0.99
FXN-203ENST00000396366 NR3C2P08235 984 aa21.25■□□□□ 0.99
FXN-203ENST00000396366 CCL23P55773 120 aa21.25■□□□□ 0.99
FXN-203ENST00000396366 TMEM240Q5SV17 173 aa21.25■□□□□ 0.99
FXN-203ENST00000396366 TMEM199Q8N511 208 aa21.25■□□□□ 0.99
FXN-203ENST00000396366 ZFP91Q96JP5 570 aaPredicted RBP21.25■□□□□ 0.99
FXN-203ENST00000396366 MTG1Q9BT17 334 aaPredicted RBP21.25■□□□□ 0.99
FXN-203ENST00000396366 HIPK3Q9H422 1215 aa21.25■□□□□ 0.99
FXN-203ENST00000396366 SMAD3P84022 425 aaKnown RBP21.24■□□□□ 0.99
FXN-203ENST00000396366 GHRHRQ02643 423 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 PPIGQ13427 754 aaKnown RBP eCLIP21.24■□□□□ 0.99
FXN-203ENST00000396366 NECTIN1Q15223 517 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 NBPF20Q3BBV1 942 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 CREB3L3Q68CJ9 461 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 ZNF365Q70YC5 407 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 ZNF654Q8IZM8 581 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 AFG1LQ8WV93 481 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 NOC4LQ9BVI4 516 aaKnown RBP21.24■□□□□ 0.99
FXN-203ENST00000396366 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 STXBP5LQ9Y2K9 1186 aa21.24■□□□□ 0.99
FXN-203ENST00000396366 PNMA6FA0A0J9YX94 578 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 EIF3JO75822 258 aaKnown RBP21.23■□□□□ 0.99
FXN-203ENST00000396366 CYP2C9P11712 490 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 MYCLP12524 364 aaPredicted RBP21.23■□□□□ 0.99
FXN-203ENST00000396366 CHMP4BP1P59074 171 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 ARHGAP1Q07960 439 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 BMP2KLQ5H9B9 411 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 ZNF697Q5TEC3 545 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 SEZ6LQ9BYH1 1024 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 LRRC2Q9BYS8 371 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 WNT8AQ9H1J5 351 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 TTYH1Q9H313 450 aaPredicted RBP21.23■□□□□ 0.99
FXN-203ENST00000396366 SEMA6BQ9H3T3 888 aa21.23■□□□□ 0.99
FXN-203ENST00000396366 DDX41Q9UJV9 622 aaKnown RBP21.23■□□□□ 0.99
FXN-203ENST00000396366 SH2B2O14492 632 aaPredicted RBP21.22■□□□□ 0.99
FXN-203ENST00000396366 RGS20O76081 388 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 RXRAP19793 462 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 MCM5P33992 734 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 BRDTQ58F21 947 aaPredicted RBP21.22■□□□□ 0.99
FXN-203ENST00000396366 FAM47CQ5HY64 1035 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 CASC1Q6TDU7 716 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 FCHSD1Q86WN1 690 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 RAB11FIP4Q86YS3 637 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 CMTR1Q8N1G2 835 aaKnown RBP21.22■□□□□ 0.99
FXN-203ENST00000396366 IL31RAQ8NI17 732 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 PDCD2LQ9BRP1 358 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 SCN10AQ9Y5Y9 1956 aa21.22■□□□□ 0.99
FXN-203ENST00000396366 GRXCR1A8MXD5 290 aa21.21■□□□□ 0.99
FXN-203ENST00000396366 GH1P01241 217 aa21.21■□□□□ 0.99
FXN-203ENST00000396366 NFXL1Q6ZNB6 911 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms