RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SPATA20Q8TB22 786 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 FAM204AQ9H8W3 233 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 MLXIPQ9HAP2 919 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 KLRG2A4D1S0 409 aaPredicted RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 PLCG1P19174 1290 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CDK8P49336 464 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 GTF2IP78347 998 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 STK4Q13043 487 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 GRM4Q14833 912 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 SPTY2D1Q68D10 685 aaPredicted RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 TEX11Q8IYF3 940 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CEP112Q8N8E3 955 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 FERMT2Q96AC1 680 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 PANX2Q96RD6 677 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 NOC4LQ9BVI4 516 aaKnown RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 FAM107BQ9H098 131 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 STK32BQ9NY57 414 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 DAGLAQ9Y4D2 1042 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 RGPD3A6NKT7 1758 aaPredicted RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 RGPD4Q7Z3J3 1758 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 E2F4Q16254 413 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 DOK7Q18PE1 504 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 TRIML1Q8N9V2 468 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 GLIS3Q8NEA6 775 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CCDC148Q8NFR7 591 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 JAKMIP2Q96AA8 810 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 EHD4Q9H223 541 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 ZNHIT6Q9NWK9 470 aaKnown RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 LRWD1Q9UFC0 647 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 ESYT3A0FGR9 886 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CALM1P0DP23 149 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CALM2P0DP24 149 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CALM3P0DP25 149 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CDKAL1Q5VV42 579 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 HDXQ7Z353 690 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 TMTC1Q8IUR5 882 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 NELFCDQ8IXH7 590 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 LRRC47Q8N1G4 583 aaKnown RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 COA7Q96BR5 231 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 TUBGCP2Q9BSJ2 902 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
NDE1-201ENST00000396354 REXO2Q9Y3B8 237 aaKnown RBP10.37□□□□□ -0.75
NDE1-201ENST00000396354 MYH8P13535 1937 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 GAKO14976 1311 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 POTEMA6NI47 508 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 STXBP3O00186 592 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 PSMA7O14818 248 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 AKR1B10O60218 316 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 MYBL2P10244 700 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 PPP2R5BQ15173 497 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 BEND6Q5SZJ8 279 aaPredicted RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 KCTD16Q68DU8 428 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 C16orf86Q6ZW13 317 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 FCHSD1Q86WN1 690 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 OR8K1Q8NGG5 319 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 HDAC7Q8WUI4 952 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 ANKS1AQ92625 1134 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 RBM17Q96I25 401 aaKnown RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 CDK5RAP3Q96JB5 506 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 CCDC151A5D8V7 595 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 MOCS3O95396 460 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 ATP2B4P23634 1241 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 ARHGAP25P42331 645 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 KCNJ6P48051 423 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 TNNI2P48788 182 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 SCNN1DP51172 638 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 STIM1Q13586 685 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 DGKHQ86XP1 1220 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 ZFPM1Q8IX07 1006 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 CNOT6LQ96LI5 555 aaKnown RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 DISC1Q9NRI5 854 aa10.36□□□□□ -0.75
NDE1-201ENST00000396354 PACSIN2Q9UNF0 486 aaPredicted RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 TTF2Q9UNY4 1162 aaKnown RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 ZNF646O15015 1829 aaPredicted RBP10.36□□□□□ -0.75
NDE1-201ENST00000396354 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 ANKRD40Q6AI12 368 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
NDE1-201ENST00000396354 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.754e-8■■■■■ 37.6
NDE1-201ENST00000396354 CCDC42Q96M95 316 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 EYA3Q99504 573 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.35□□□□□ -0.75
NDE1-201ENST00000396354 GOLPH3Q9H4A6 298 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 KCND1Q9NSA2 647 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 TCP11L1Q9NUJ3 509 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 PCDHA6Q9UN73 950 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 PCDHA8Q9Y5H6 950 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 EPHB6O15197 1021 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 ZNF658Q5TYW1 1059 aaPredicted RBP10.35□□□□□ -0.75
NDE1-201ENST00000396354 RRAGAQ7L523 313 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms