RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 DUSP28Q4G0W2 176 aa10.24□□□□□ -0.77
PTPN20-205ENST00000395721 BRDTQ58F21 947 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-205ENST00000395721 TMEM67Q5HYA8 995 aa10.24□□□□□ -0.77
PTPN20-205ENST00000395721 CXCL17Q6UXB2 119 aa10.24□□□□□ -0.77
PTPN20-205ENST00000395721 MAP7D2Q96T17 732 aa10.24□□□□□ -0.77
PTPN20-205ENST00000395721 AMNQ9BXJ7 453 aa10.24□□□□□ -0.77
PTPN20-205ENST00000395721 JMJD4Q9H9V9 463 aa10.24□□□□□ -0.77
PTPN20-205ENST00000395721 CTAGE5O15320 804 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 FPGSQ05932 587 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 GRM4Q14833 912 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 CATIPQ7Z7H3 387 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 SCFD2Q8WU76 684 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 SEZ6LQ9BYH1 1024 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 NKRFO15226 690 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPN20-205ENST00000395721 FAAP100Q0VG06 881 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 MAP4K1Q92918 833 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
PTPN20-205ENST00000395721 BRCA2P51587 3418 aa10.23□□□□□ -0.77
PTPN20-205ENST00000395721 RBM47A0AV96 593 aaKnown RBP10.22□□□□□ -0.77
PTPN20-205ENST00000395721 MYL3P08590 195 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 EDNRBP24530 442 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 CPT1AP50416 773 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 CDK7P50613 346 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 SHHQ15465 462 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 ZSCAN30Q86W11 494 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 STAG2Q8N3U4 1231 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 SYTL5Q8TDW5 730 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-205ENST00000395721 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
PTPN20-205ENST00000395721 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 TBX21Q9UL17 535 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 PTGS1P23219 599 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 ITGA7Q13683 1181 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 TTLL4Q14679 1199 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
PTPN20-205ENST00000395721 STOX1Q6ZVD7 989 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 DEFB123Q8N688 67 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 RNPC3Q96LT9 517 aaKnown RBP10.22□□□□□ -0.77
PTPN20-205ENST00000395721 CHMP5Q9NZZ3 219 aa10.22□□□□□ -0.77
PTPN20-205ENST00000395721 UQCRHLA0A096LP55 91 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.77
PTPN20-205ENST00000395721 ZBTB5O15062 677 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 CFBP00751 764 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 TIMP1P01033 207 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 UQCRHP07919 91 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 PPIGQ13427 754 aaKnown RBP eCLIP10.21□□□□□ -0.77
PTPN20-205ENST00000395721 C9orf50Q5SZB4 431 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 ARHGEF16Q5VV41 709 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 CHST3Q7LGC8 479 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 FAM126BQ8IXS8 530 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 TAAR1Q96RJ0 339 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 RMDN3Q96TC7 470 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 MAD2L2Q9UI95 211 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.77
PTPN20-205ENST00000395721 TXNP10599 105 aaKnown RBP10.21□□□□□ -0.78
PTPN20-205ENST00000395721 MSNP26038 577 aaKnown RBP10.21□□□□□ -0.78
PTPN20-205ENST00000395721 NFXL1Q6ZNB6 911 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.78
PTPN20-205ENST00000395721 CTCFLQ8NI51 663 aaPredicted RBP10.21□□□□□ -0.78
PTPN20-205ENST00000395721 TBC1D5Q92609 795 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 TBC1D32Q96NH3 1257 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 IWS1Q96ST2 819 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 MTG1Q9BT17 334 aaPredicted RBP10.21□□□□□ -0.78
PTPN20-205ENST00000395721 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 PCDHA1Q9Y5I3 950 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 MYH6P13533 1939 aa10.21□□□□□ -0.78
PTPN20-205ENST00000395721 PRC1O43663 620 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 KPNA6O60684 536 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 EIF2AK2P19525 551 aaKnown RBP10.2□□□□□ -0.78
PTPN20-205ENST00000395721 ITGB8P26012 769 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 STXBP2Q15833 593 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 BMP2KLQ5H9B9 411 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 TMEM63BQ5T3F8 832 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 TMEM199Q8N511 208 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 MTMR8Q96EF0 704 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 LSG1Q9H089 658 aaKnown RBP10.2□□□□□ -0.78
PTPN20-205ENST00000395721 UPF2Q9HAU5 1272 aaKnown RBP10.2□□□□□ -0.78
PTPN20-205ENST00000395721 DDAH1O94760 285 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 KIF5BP33176 963 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 ANTXR2P58335 489 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 PSMC6P62333 389 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 ZNF697Q5TEC3 545 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 MFSD5Q6N075 450 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 SEPT14Q6ZU15 432 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 Q7L0L9 218 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 PIGSQ96S52 555 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 SENP2Q9HC62 589 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 CCDC69A6NI79 296 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 SLC27A2O14975 620 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 GH1P01241 217 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 MCM5P33992 734 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 DMTNQ08495 405 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 FAM47CQ5HY64 1035 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 RNF20Q5VTR2 975 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 ZNF654Q8IZM8 581 aa10.2□□□□□ -0.78
PTPN20-205ENST00000395721 SAMD3Q8N6K7 520 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms