RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 PIK3CDO00329 1044 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 EIF3JO75822 258 aaKnown RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 APPP05067 770 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 NMIQ13287 307 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 PUS10Q3MIT2 529 aaKnown RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 TBC1D10CQ8IV04 446 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 OR6J1Q8NGC5 347 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 OTUD7AQ8TE49 926 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 NSUN6Q8TEA1 469 aaKnown RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 YBX2Q9Y2T7 364 aaKnown RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 TRIP12Q14669 1992 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 NFIBO00712 420 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 PRDM1O75626 825 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 HTRA4P83105 476 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 VPS53Q5VIR6 699 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 KCTD1Q719H9 257 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 FBXO16Q8IX29 292 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 SYTL5Q8TDW5 730 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 ZSCAN10Q96SZ4 725 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 GTF2IRD1Q9UHL9 959 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 NEDD4P46934 1319 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 RPS6P62753 249 aaKnown RBP7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 PDE4DQ08499 809 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 GRM4Q14833 912 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 DDX41Q9UJV9 622 aaKnown RBP7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 SQORQ9Y6N5 450 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 NID2Q14112 1375 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 KMT2EQ8IZD2 1858 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 GPNMBQ14956 572 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 CXCL17Q6UXB2 119 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 ZNF589Q86UQ0 364 aaPredicted RBP7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 CHD1LQ86WJ1 897 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 KAT2BQ92831 832 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 PDGFCQ9NRA1 345 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 ERVK-21P61565 698 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 IQCA1Q86XH1 822 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 PXMP2Q9NR77 195 aa7.29□□□□□ -1.24
SMARCAD1-203ENST00000394961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 OPLAHO14841 1288 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 DYNC1LI2O43237 492 aaPredicted RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 BEX3Q00994 111 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 STXBP2Q15833 593 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 TTBK2Q6IQ55 1244 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 KIAA1211Q6ZU35 1233 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 APBB2Q92870 758 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 FAM227BQ96M60 508 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 LZTS2Q9BRK4 669 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 LMAN2LQ9H0V9 348 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 STX8Q9UNK0 236 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 MTCH2Q9Y6C9 303 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 TRIOBPQ9H2D6 2365 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 FNDC1Q4ZHG4 1894 aaPredicted RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 NMT2O60551 498 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 SELPP16109 830 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 CYP2C18P33260 490 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 ADAM17P78536 824 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 ADGRE1Q14246 886 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 CDC37Q16543 378 aaPredicted RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 NBPF20Q3BBV1 942 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 HERC6Q8IVU3 1022 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 PNMA1Q8ND90 353 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 NKX2-4Q9H2Z4 354 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 DENND4AQ7Z401 1863 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 C5orf67F2Z3F1 127 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 ZNF213O14771 459 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 RANBP6O60518 1105 aaKnown RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 BMP1P13497 986 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 DGKDQ16760 1214 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 ADGRF4Q8IZF3 695 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 ENAHQ8N8S7 591 aaPredicted RBP7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 SPZ1Q9BXG8 430 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 JMJD4Q9H9V9 463 aa7.28□□□□□ -1.24
SMARCAD1-203ENST00000394961 PPFIA4O75335 1185 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 ATP2A2P16615 1042 aaKnown RBP7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 SERINC5Q86VE9 423 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 VSIG10LQ86VR7 867 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 USP38Q8NB14 1042 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 RETREG2Q8NC44 543 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 SENP7Q9BQF6 1050 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 AMNQ9BXJ7 453 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 TRPV6Q9H1D0 765 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 MAD2L2Q9UI95 211 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 BRCA2P51587 3418 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 ZBTB5O15062 677 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 TLL1O43897 1013 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 CASTP20810 708 aaKnown RBP7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 RCAN1P53805 252 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 TAP1Q03518 808 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 IMMTQ16891 758 aaKnown RBP7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 CELF3Q5SZQ8 465 aaKnown RBP7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 ANKRD45Q5TZF3 282 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 TSHZ3Q63HK5 1081 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 FBXO11Q86XK2 927 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 GIMAP8Q8ND71 665 aaPredicted RBP7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 CRBNQ96SW2 442 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 UMODL1Q5DID0 1318 aa7.27□□□□□ -1.25
SMARCAD1-203ENST00000394961 LPXNO60711 386 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms