RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 ARHGAP27Q6ZUM4 889 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 CCDC90BQ9GZT6 254 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 TSKSQ9UJT2 592 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 CSADQ9Y600 493 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PLTPP55058 493 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 NIM1KQ8IY84 436 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 MAGOHBQ96A72 148 aaKnown RBP13.31□□□□□ -0.28
SIN3A-202ENST00000394947 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 COG4Q9H9E3 785 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 NXF1Q9UBU9 619 aaKnown RBP13.31□□□□□ -0.28
SIN3A-202ENST00000394947 DNAJC8O75937 253 aaPredicted RBP13.31□□□□□ -0.28
SIN3A-202ENST00000394947 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
SIN3A-202ENST00000394947 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 NEUROG2Q9H2A3 272 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
SIN3A-202ENST00000394947 ZNF18P17022 549 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 RWDD4Q6NW29 188 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 LRFN2Q9ULH4 789 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 EPHB1P54762 984 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 OCRLQ01968 901 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 ADAM9Q13443 819 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 SLMAPQ14BN4 828 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 GLE1Q53GS7 698 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 EPB41L5Q9HCM4 733 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 SARS2Q9NP81 518 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 CLRN2A0PK11 232 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 ZSCAN9O15535 394 aaPredicted RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 FTCDO95954 541 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 GRAMD1BQ3KR37 738 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 AFF4Q9UHB7 1163 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 KDM2BQ8NHM5 1336 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 RBM46Q8TBY0 533 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 AP1M1Q9BXS5 423 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 SLC24A3Q9HC58 644 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 E7EWF7 191 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 KRT1P04264 644 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 PDHA1P08559 390 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 SNX19Q92543 992 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 CPSF3Q9UKF6 684 aaKnown RBP13.3□□□□□ -0.28
SIN3A-202ENST00000394947 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
SIN3A-202ENST00000394947 FAM95CA0A1B0GW59 222 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 GOLGA8CPA6NN73 597 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 MSH2P43246 934 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 KCTD1Q719H9 257 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 CATSPER3Q86XQ3 398 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 TRIM58Q8NG06 486 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 RASGRP4Q8TDF6 673 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 GOLGA8MH3BSY2 632 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 GSPT1P15170 499 aaKnown RBP13.29□□□□□ -0.28
SIN3A-202ENST00000394947 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 KLHL29Q96CT2 875 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 FANCLQ9NW38 375 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 H0Y3Z8 333 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 NSFP46459 744 aaKnown RBP13.29□□□□□ -0.28
SIN3A-202ENST00000394947 IL9RQ01113 521 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 TAGAPQ8N103 731 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 TYW1Q9NV66 732 aaKnown RBP13.29□□□□□ -0.28
SIN3A-202ENST00000394947 MAP3K7O43318 606 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 MAPK4P31152 587 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 ESRRGP62508 458 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 PPARAQ07869 468 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
SIN3A-202ENST00000394947 TYW5A2RUC4 315 aaKnown RBP13.29□□□□□ -0.28
SIN3A-202ENST00000394947 SOX11P35716 441 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 HIF1AQ16665 826 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 PDZD4Q76G19 769 aaPredicted RBP13.29□□□□□ -0.28
SIN3A-202ENST00000394947 SNX25Q9H3E2 840 aa13.29□□□□□ -0.28
SIN3A-202ENST00000394947 GRAMD1CQ8IYS0 662 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 CCDC197Q8NCU1 140 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 NRBP1Q9UHY1 535 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 TRPC5Q9UL62 973 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 GYG1P46976 350 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 SKOR1P84550 965 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 ARHGEF18Q6ZSZ5 1173 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 PLA2G4DQ86XP0 818 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 B4GALNT2Q8NHY0 566 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 APPBP2Q92624 585 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 LBHD1Q9BQE6 289 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms