RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 PIGSQ96S52 555 aa26.71■■□□□ 1.87
PMS2P3-201ENST00000394921 KIAA1217Q5T5P2 1943 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 ARIH2O95376 493 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 TIMP1P01033 207 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 HSD17B4P51659 736 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 PPP2R5BQ15173 497 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 CATIPQ7Z7H3 387 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 HOMER1Q86YM7 354 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 RMDN3Q96TC7 470 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 MTA3Q9BTC8 594 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 ANO2Q9NQ90 1003 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 PCDHA1Q9Y5I3 950 aa26.7■■□□□ 1.87
PMS2P3-201ENST00000394921 NKRFO15226 690 aaKnown RBP eCLIP26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 PRC1O43663 620 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 CFBP00751 764 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 PSMC6P62333 389 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 CCDC62Q6P9F0 684 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 Q7L0L9 218 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 IWS1Q96ST2 819 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 SCN10AQ9Y5Y9 1956 aa26.69■■□□□ 1.86
PMS2P3-201ENST00000394921 TLR3O15455 904 aaKnown RBP26.68■■□□□ 1.86
PMS2P3-201ENST00000394921 TXNP10599 105 aaKnown RBP26.68■■□□□ 1.86
PMS2P3-201ENST00000394921 FPGSQ05932 587 aa26.68■■□□□ 1.86
PMS2P3-201ENST00000394921 ZNF654Q8IZM8 581 aa26.68■■□□□ 1.86
PMS2P3-201ENST00000394921 SH2B2O14492 632 aaPredicted RBP26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 EIF2AK2P19525 551 aaKnown RBP26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 MCM5P33992 734 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 CPT1AP50416 773 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 PURAQ00577 322 aaKnown RBP26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 TTLL4Q14679 1199 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 DEFB123Q8N688 67 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 MAP3K14Q99558 947 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 MYL10Q9BUA6 226 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 SEZ6LQ9BYH1 1024 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 PXMP2Q9NR77 195 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 POLR3EQ9NVU0 708 aa26.67■■□□□ 1.86
PMS2P3-201ENST00000394921 A6NJR5 290 aa26.66■■□□□ 1.86
PMS2P3-201ENST00000394921 DDAH1O94760 285 aa26.66■■□□□ 1.86
PMS2P3-201ENST00000394921 STXBP2Q15833 593 aa26.66■■□□□ 1.86
PMS2P3-201ENST00000394921 ARHGEF16Q5VV41 709 aa26.66■■□□□ 1.86
PMS2P3-201ENST00000394921 MFSD5Q6N075 450 aa26.66■■□□□ 1.86
PMS2P3-201ENST00000394921 CASC1Q6TDU7 716 aa26.66■■□□□ 1.86
PMS2P3-201ENST00000394921 PNMA6FA0A0J9YX94 578 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 NR3C2P08235 984 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 MYL3P08590 195 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 TMEM87BQ96K49 555 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 TRPV6Q9H1D0 765 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 MAP3K20Q9NYL2 800 aaKnown RBP26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 HOXA13P31271 388 aaPredicted RBP26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 SEPT14Q6ZU15 432 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 SAMD3Q8N6K7 520 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 MTG1Q9BT17 334 aaPredicted RBP26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 PPP1R12CQ9BZL4 782 aa26.65■■□□□ 1.86
PMS2P3-201ENST00000394921 B4GALT4O60513 344 aa26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 EIF3JO75822 258 aaKnown RBP26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 TRAF1Q13077 416 aa26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 LY6KQ17RY6 165 aa26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 CTCFLQ8NI51 663 aaPredicted RBP26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 PDCD2LQ9BRP1 358 aa26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 SPZ1Q9BXG8 430 aa26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 MTMR10Q9NXD2 777 aa26.64■■□□□ 1.85
PMS2P3-201ENST00000394921 CDC45O75419 566 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 CYP2C18P33260 490 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 LIFRP42702 1097 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 ARHGAP1Q07960 439 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 BRDTQ58F21 947 aaPredicted RBP26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 C16orf59Q7L2K0 433 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 TMTC2Q8N394 836 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 PIBF1Q8WXW3 757 aa26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 ALDH8A1Q9H2A2 487 aaPredicted RBP26.63■■□□□ 1.85
PMS2P3-201ENST00000394921 COL6A3P12111 3177 aa26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 CSF2RAP15509 400 aa26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 FAM109BQ6ICB4 259 aaPredicted RBP26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 IL31RAQ8NI17 732 aa26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 RNPC3Q96LT9 517 aaKnown RBP26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 LRRC2Q9BYS8 371 aa26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 DDX41Q9UJV9 622 aaKnown RBP26.62■■□□□ 1.85
PMS2P3-201ENST00000394921 UMODL1Q5DID0 1318 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 GCOM1H8Y6P7 765 aaPredicted RBP26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 KPNA6O60684 536 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 RGS20O76081 388 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 PLEKHA8P1O95397 391 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 GH1P01241 217 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 POLR2MP0CAP2 368 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 SMARCA1P28370 1054 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 KIF5BP33176 963 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 PPIGQ13427 754 aaKnown RBP eCLIP26.61■■□□□ 1.851e-11■■□□□ 13.7
PMS2P3-201ENST00000394921 NFXL1Q6ZNB6 911 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 AFG1LQ8WV93 481 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 CCDC136Q96JN2 1154 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.61■■□□□ 1.854e-10■□□□□ 10.5
PMS2P3-201ENST00000394921 NOC4LQ9BVI4 516 aaKnown RBP26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 HIPK3Q9H422 1215 aa26.61■■□□□ 1.85
PMS2P3-201ENST00000394921 CCDC69A6NI79 296 aa26.6■■□□□ 1.85
PMS2P3-201ENST00000394921 RXRAP19793 462 aa26.6■■□□□ 1.85
PMS2P3-201ENST00000394921 PGM5Q15124 567 aa26.6■■□□□ 1.85
PMS2P3-201ENST00000394921 NBPF20Q3BBV1 942 aa26.6■■□□□ 1.85
PMS2P3-201ENST00000394921 VSIG10LQ86VR7 867 aa26.6■■□□□ 1.85
PMS2P3-201ENST00000394921 TMEM199Q8N511 208 aa26.6■■□□□ 1.85
PMS2P3-201ENST00000394921 SRBD1Q8N5C6 995 aaKnown RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms