RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 MAGEF1Q9HAY2 307 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 TLR7Q9NYK1 1049 aaKnown RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 USP17L3A6NCW0 530 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 USP17L4A6NCW7 530 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 BRD1O95696 1058 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 ATF2P15336 505 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 NDUFA8P51970 172 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 SH2D4BQ5SQS7 431 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 ZMYM1Q5SVZ6 1142 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 USP17L1Q7RTZ2 530 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 POTEDQ86YR6 584 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 CACTINQ8WUQ7 758 aaKnown RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
COL4A6-203ENST00000394872 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 NACC1Q96RE7 527 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 DESI2Q9BSY9 194 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 GPR108Q9NPR9 543 aa11.34□□□□□ -0.59
COL4A6-203ENST00000394872 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.59
COL4A6-203ENST00000394872 TXNDC9O14530 226 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 CLGNO14967 610 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 GAP43P17677 238 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 GARSP41250 739 aaKnown RBP11.33□□□□□ -0.59
COL4A6-203ENST00000394872 BPIFB4P59827 614 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.33□□□□□ -0.59
COL4A6-203ENST00000394872 CEP120Q8N960 986 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 RPGRIP1Q96KN7 1286 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 DPH5Q9H2P9 285 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.59
COL4A6-203ENST00000394872 PCDHA7Q9UN72 937 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 UGGT1Q9NYU2 1555 aa11.33□□□□□ -0.59
COL4A6-203ENST00000394872 S100BP04271 92 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 WHAMMP3Q1A5X7 153 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 BBS5Q8N3I7 341 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 PIGSQ96S52 555 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 WDR11Q9BZH6 1224 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 TYW1Q9NV66 732 aaKnown RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 ZNF148Q9UQR1 794 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 MAD1L1Q9Y6D9 718 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 RNF40O75150 1001 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 PSMC2P35998 433 aaKnown RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 ARHGEF25Q86VW2 580 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 CCDC170Q8IYT3 715 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 PPP1R16BQ96T49 567 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 COBLO75128 1261 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 NPR1P16066 1061 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 LMNB1P20700 586 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 ADD2P35612 726 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 ECE1P42892 770 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 MAP7D3Q8IWC1 876 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 GDAP1L1Q96MZ0 367 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 H2AFZP0C0S5 128 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 PPP2R5EQ16537 467 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 TSNAXIP1Q2TAA8 658 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 H2AFVQ71UI9 128 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 ZBTB33Q86T24 672 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 SLC10A4Q96EP9 437 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 CDHR1Q96JP9 859 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 PI4KBQ9UBF8 816 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 SRP68Q9UHB9 627 aaKnown RBP11.33□□□□□ -0.6
COL4A6-203ENST00000394872 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
COL4A6-203ENST00000394872 UNC5CLQ8IV45 518 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 TBCKQ8TEA7 893 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 COA7Q96BR5 231 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 FOXP1Q9H334 677 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 PCIF1Q9H4Z3 704 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 FANCLQ9NW38 375 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 BCAP29Q9UHQ4 241 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 NLRP10Q86W26 655 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 RNF26Q9BY78 433 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 SLC38A10Q9HBR0 1119 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 SLC12A6Q9UHW9 1150 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 METP08581 1390 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 MEIS1O00470 390 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 NR2F2P24468 414 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 OAS2P29728 719 aaKnown RBP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 RBBP5Q15291 538 aaKnown RBP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL4A6-203ENST00000394872 MIPOL1Q8TD10 442 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 FAM149B1Q96BN6 582 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 RASSF4Q9H2L5 321 aa11.32□□□□□ -0.6
COL4A6-203ENST00000394872 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms