RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 INPP5BP32019 993 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 ERVK-24P63145 666 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 TAOK3Q9H2K8 898 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 TBC1D22AQ8WUA7 517 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 PANK4Q9NVE7 773 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 NWD2Q9ULI1 1742 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 PRPHP41219 470 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 LRRC63Q05C16 580 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 PKN1Q16512 942 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 HS2ST1Q7LGA3 356 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 CCDC26Q8TAB7 109 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 PIGSQ96S52 555 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 BARHL2Q9NY43 387 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 LEMD3Q9Y2U8 911 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 GLI3P10071 1580 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 KCNQ2O43526 872 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 FLOT1O75955 427 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 TRIM37O94972 964 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 FAM13AO94988 1023 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 CXCR5P32302 372 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 HPDP32754 393 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 BEND6Q5SZJ8 279 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 NOA1Q8NC60 698 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 DYDC1Q8WWB3 177 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 TMEM47Q9BQJ4 181 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 TRIM10Q9UDY6 481 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 PNKPQ96T60 521 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 PLEKHA4Q9H4M7 779 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 NTSR2O95665 410 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 MYZAPP0CAP1 466 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 SRGNP10124 158 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 HOXA7P31268 230 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 LRRC41Q15345 812 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 DDX25Q9UHL0 483 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-209ENST00000394804 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 VGLL3A8MV65 326 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 hCG_1984214I3L0E3 225 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 CALUO43852 315 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 CCT5P48643 541 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 APBA1Q02410 837 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 TNIP1Q15025 636 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 ZNF713Q8N859 430 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 COG1Q8WTW3 980 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 TMOD2Q9NZR1 351 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 A0A087X0B3 334 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 PSMD14O00487 310 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 UIMC1Q96RL1 719 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 MMS19Q96T76 1030 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 RIOK1Q9BRS2 568 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 TRIM9Q9C026 710 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 GUCY2DQ02846 1103 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 EARS2Q5JPH6 523 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 RUFY4Q6ZNE9 571 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 DNM3Q9UQ16 869 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 COL4A3BPQ9Y5P4 624 aa12.87□□□□□ -0.35
UBE2D3-209ENST00000394804 SASH3O75995 380 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 TRAF1Q13077 416 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 PSMD2Q13200 908 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 TMEM139Q8IV31 216 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 RBM17Q96I25 401 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms