RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PHLPP2Q6ZVD8 1323 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 hCG_2014768A0A024R1R8 64 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 STX3Q13277 289 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 LSM14BQ9BX40 385 aaKnown RBP14.49□□□□□ -0.09
USP49-203ENST00000394253 ARHGEF10LQ9HCE6 1279 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 PKD2L2Q9NZM6 624 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 CFAP73A6NFT4 308 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 CYLC2Q14093 348 aaPredicted RBP14.49□□□□□ -0.09
USP49-203ENST00000394253 TRIM67Q6ZTA4 783 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 PAMP19021 973 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 LONRF3Q496Y0 759 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 BICC1Q9H694 974 aaKnown RBP14.49□□□□□ -0.09
USP49-203ENST00000394253 GEMIN8Q9NWZ8 242 aaKnown RBP14.49□□□□□ -0.09
USP49-203ENST00000394253 LZTS1Q9Y250 596 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 RNF103-CHMP3A0A140T963 221 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 PTK2BQ14289 1009 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 CYTH1Q15438 398 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 CEP85Q6P2H3 762 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 OTUD6AQ7L8S5 288 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 MCM9Q9NXL9 1143 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 RWDD3Q9Y3V2 267 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 CNTRLQ7Z7A1 2325 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 YWHAHQ04917 246 aaPredicted RBP14.49□□□□□ -0.09
USP49-203ENST00000394253 BATF3Q9NR55 127 aa14.49□□□□□ -0.09
USP49-203ENST00000394253 XPOTO43592 962 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 XPAP23025 273 aaPredicted RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 NUP62P37198 522 aaPredicted RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 NSMCE4AQ9NXX6 385 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 MAPK8IP1Q9UQF2 711 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 LAMC2Q13753 1193 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SLFNL1Q499Z3 407 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SLC17A8Q8NDX2 589 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 APOBEC2Q9Y235 224 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 IQCA1LA6NCM1 817 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 TMED2Q15363 201 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SNRKQ9NRH2 765 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 ITSN2Q9NZM3 1697 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 CFLARO15519 480 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 S100A9P06702 114 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 HSPD1P10809 573 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 CAPN12Q6ZSI9 719 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 NOP9Q86U38 636 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 CATSPER3Q86XQ3 398 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 LRRC8AQ8IWT6 810 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 U2AF1L4Q8WU68 220 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 SNX19Q92543 992 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 AZI2Q9H6S1 392 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 ARHGEF3Q9NR81 526 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 UTP6Q9NYH9 597 aaKnown RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 ITGB1BP2Q9UKP3 347 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 ARIH1Q9Y4X5 557 aaPredicted RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 CAPN1P07384 714 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 PTPRGP23470 1445 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 IMPDH2P12268 514 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SP4Q02446 784 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 CCDC142Q17RM4 750 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SYT2Q8N9I0 419 aaPredicted RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 ZNF555Q8NEP9 628 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 DEPDC1BQ8WUY9 529 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SPARCL1Q14515 664 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 ZNF174Q15697 407 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 KRT39Q6A163 491 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 B4GALNT2Q8NHY0 566 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 F6X3S4 739 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 BFSP2Q13515 415 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 SPOPLQ6IQ16 392 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 NEK8Q86SG6 692 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 PROSER2Q86WR7 435 aaPredicted RBP14.48□□□□□ -0.09
USP49-203ENST00000394253 KDM4CQ9H3R0 1056 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 PPP2R2CQ9Y2T4 447 aa14.48□□□□□ -0.09
USP49-203ENST00000394253 IL15P40933 162 aaPredicted RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 BPIFB4P59827 614 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 KIF22Q14807 665 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 FRA10AC1Q70Z53 315 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 TEX2Q8IWB9 1127 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 MIGA1Q8NAN2 632 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 ASZ1Q8WWH4 475 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 MED10Q9BTT4 135 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 TADA1Q96BN2 335 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 ZNF653Q96CK0 615 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 PARVGQ9HBI0 331 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 CDH2P19022 906 aaPredicted RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 NDUFA5Q16718 116 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 TSHZ3Q63HK5 1081 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 FAM180AQ6UWF9 173 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 WDR75Q8IWA0 830 aaKnown RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 RHPN1Q8TCX5 695 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 TMEM87BQ96K49 555 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 MT-ND3P03897 115 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 PTPREP23469 700 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 DMC1Q14565 340 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 DTX3LQ8TDB6 740 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 ARHGAP45Q92619 1136 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 TRAF3IP3Q9Y228 551 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 DMP1Q13316 513 aaPredicted RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 BRD8Q9H0E9 1235 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 IBTKQ9P2D0 1353 aaPredicted RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 NCOA2Q15596 1464 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 NBPF26B4DH59 902 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 GOLGA8TH3BQL2 631 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms