RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 PPP4R2Q9NY27 417 aa23.87■■□□□ 1.41
UBE2E3-201ENST00000392415 LTBP2Q14767 1821 aa23.87■■□□□ 1.41
UBE2E3-201ENST00000392415 CALM1P0DP23 149 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 CALM2P0DP24 149 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 CALM3P0DP25 149 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 GNAQP50148 359 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 EXOSC10Q01780 885 aaKnown RBP23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 KRT32Q14532 448 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 SCFD2Q8WU76 684 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 LBHD1Q9BQE6 289 aaPredicted RBP23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 SLC12A7Q9Y666 1083 aa23.86■■□□□ 1.41
UBE2E3-201ENST00000392415 PQBP1O60828 265 aaKnown RBP23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 CDK7P50613 346 aa23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 ADCK5Q3MIX3 580 aa23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 DHX32Q7L7V1 743 aaKnown RBP23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 SH3RF1Q7Z6J0 888 aa23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 KCNB2Q92953 911 aa23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 UBE2OQ9C0C9 1292 aaKnown RBP23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 PRDM5Q9NQX1 630 aaPredicted RBP23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 KIAA1217Q5T5P2 1943 aa23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 LAMA2P24043 3122 aaKnown RBP23.85■■□□□ 1.41
UBE2E3-201ENST00000392415 A0A0U1RQG5 324 aaPredicted RBP23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 TRIM43BA6NCK2 446 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 NKRFO15226 690 aaKnown RBP eCLIP23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 ZEB2O60315 1214 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 CABYRO75952 493 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 CLTBP09497 229 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 PPP2R5BQ15173 497 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 STXBP2Q15833 593 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 ARHGEF16Q5VV41 709 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 CXCL17Q6UXB2 119 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 VTI1AQ96AJ9 217 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 TRIM43Q96BQ3 446 aaPredicted RBP23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 PXMP2Q9NR77 195 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 ARVCFO00192 962 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 PLEKHA8P1O95397 391 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 RXRAP19793 462 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 FAAP100Q0VG06 881 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 TDHQ8IZJ6 230 aa23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 SRBD1Q8N5C6 995 aaKnown RBP23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 RRP36Q96EU6 259 aaKnown RBP23.84■■□□□ 1.41
UBE2E3-201ENST00000392415 MROH7Q68CQ1 1323 aa23.83■■□□□ 1.41
UBE2E3-201ENST00000392415 DCDC2CA8MYV0 355 aa23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 CENPBP07199 599 aaPredicted RBP23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 EIF2AK2P19525 551 aaKnown RBP23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 HSPA4P34932 840 aa23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 TTLL4Q14679 1199 aa23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 CCDC62Q6P9F0 684 aa23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 FANCBQ8NB91 859 aa23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 PIBF1Q8WXW3 757 aa23.83■■□□□ 1.4
UBE2E3-201ENST00000392415 GCOM1H8Y6P7 765 aaPredicted RBP23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 KIAA0355O15063 1070 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 REC8O95072 547 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 ARIH2O95376 493 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 NR3C2P08235 984 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 HMGB1P09429 215 aaKnown RBP23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 POLR2MP0CAP2 368 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 TXNP10599 105 aaKnown RBP23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 HOXA13P31271 388 aaPredicted RBP23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 CPT1AP50416 773 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 SLC43A3Q8NBI5 491 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 OR6J1Q8NGC5 347 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 TCEANC2Q96MN5 208 aa23.82■■□□□ 1.4
UBE2E3-201ENST00000392415 EIF3JO75822 258 aaKnown RBP23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 APOA5Q6Q788 366 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 SYNE3Q6ZMZ3 975 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 SEPT14Q6ZU15 432 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 MICU3Q86XE3 530 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 RAB11FIP4Q86YS3 637 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 CMTR1Q8N1G2 835 aaKnown RBP23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 BADQ92934 168 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 PDCD2LQ9BRP1 358 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 TMEM39AQ9NV64 488 aa23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 SEC63Q9UGP8 760 aaKnown RBP23.81■■□□□ 1.4
UBE2E3-201ENST00000392415 GRIN2DO15399 1336 aa23.8■■□□□ 1.4
UBE2E3-201ENST00000392415 ITGB8P26012 769 aa23.8■■□□□ 1.4
UBE2E3-201ENST00000392415 COPS5Q92905 334 aa23.8■■□□□ 1.4
UBE2E3-201ENST00000392415 SEZ6LQ9BYH1 1024 aa23.8■■□□□ 1.4
UBE2E3-201ENST00000392415 POLR3EQ9NVU0 708 aa23.8■■□□□ 1.4
UBE2E3-201ENST00000392415 SNX14Q9Y5W7 946 aa23.8■■□□□ 1.4
UBE2E3-201ENST00000392415 A6NJR5 290 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 EPB41L2O43491 1005 aaKnown RBP23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 ITGA7Q13683 1181 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 TMTC3Q6ZXV5 915 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 VSIG10LQ86VR7 867 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 FAM126BQ8IXS8 530 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 TBX21Q9UL17 535 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 BRPF3Q9ULD4 1205 aa23.79■■□□□ 1.4
UBE2E3-201ENST00000392415 RAG1P15918 1043 aa23.78■■□□□ 1.4
UBE2E3-201ENST00000392415 PURAQ00577 322 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-201ENST00000392415 PGM5Q15124 567 aa23.78■■□□□ 1.4
UBE2E3-201ENST00000392415 LRIT3Q3SXY7 679 aa23.78■■□□□ 1.4
UBE2E3-201ENST00000392415 BRDTQ58F21 947 aaPredicted RBP23.78■■□□□ 1.4
UBE2E3-201ENST00000392415 DDX41Q9UJV9 622 aaKnown RBP23.78■■□□□ 1.4
UBE2E3-201ENST00000392415 SOX1O00570 391 aaPredicted RBP23.77■■□□□ 1.4
UBE2E3-201ENST00000392415 LY6KQ17RY6 165 aa23.77■■□□□ 1.4
UBE2E3-201ENST00000392415 FCHSD1Q86WN1 690 aa23.77■■□□□ 1.4
UBE2E3-201ENST00000392415 RBM28Q9NW13 759 aaKnown RBP23.77■■□□□ 1.4
UBE2E3-201ENST00000392415 SCN10AQ9Y5Y9 1956 aa23.76■■□□□ 1.39
UBE2E3-201ENST00000392415 TLR3O15455 904 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms