RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 ACER1Q8TDN7 264 aa23.82■■□□□ 1.4
SPTBN4-203ENST00000392023 SNX29Q8TEQ0 813 aa23.82■■□□□ 1.4
SPTBN4-203ENST00000392023 CDK5RAP3Q96JB5 506 aa23.82■■□□□ 1.4
SPTBN4-203ENST00000392023 SLC39A2Q9NP94 309 aa23.82■■□□□ 1.4
SPTBN4-203ENST00000392023 PSDA5PKW4 1024 aaPredicted RBP23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 ENTPD3O75355 529 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 CASP14P31944 242 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 ZYXQ15942 572 aaKnown RBP23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 TMEM266Q2M3C6 531 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 CTAGE1Q96RT6 745 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 TMEM39BQ9GZU3 492 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 KCND1Q9NSA2 647 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 RNF225M0QZC1 329 aaPredicted RBP23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 COPB1P53618 953 aaKnown RBP23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 KCNB1Q14721 858 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 PPP1R18Q6NYC8 613 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 EXOC1Q9NV70 894 aa23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 ZNF70Q9UC06 446 aaPredicted RBP23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 DDX41Q9UJV9 622 aaKnown RBP23.81■■□□□ 1.4
SPTBN4-203ENST00000392023 SHTN1A0MZ66 631 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 MYMKA6NI61 221 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 SOWAHDA6NJG2 315 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 AKR1B15C9JRZ8 316 aaPredicted RBP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 TULP2O00295 520 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 PBX1P40424 430 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 FXR2P51116 673 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 CCDC84Q86UT8 332 aaPredicted RBP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 PPFIBP1Q86W92 1011 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 OGFOD1Q8N543 542 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 TRIM47Q96LD4 638 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 ATF5Q9Y2D1 282 aaPredicted RBP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 MEIS2O14770 477 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 HOXA13P31271 388 aaPredicted RBP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 FXR1P51114 621 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 SV2BQ7L1I2 683 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 REXO1L1PQ8IX06 675 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 TMOD2Q9NZR1 351 aa23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 V9GYY5 206 aaPredicted RBP23.8■■□□□ 1.4
SPTBN4-203ENST00000392023 NKRFO15226 690 aaKnown RBP eCLIP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 PPP4R3AQ6IN85 833 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 RTKN2Q8IZC4 609 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 KIF18AQ8NI77 898 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 PPP1R1BQ9UD71 204 aaPredicted RBP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 LIMA1Q9UHB6 759 aaKnown RBP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 PCDHA12Q9UN75 941 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 ARHGAP6O43182 974 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 NPM3O75607 178 aaKnown RBP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 VIL1P09327 827 aaKnown RBP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 BMP3P12645 472 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 NCBP1Q09161 790 aaKnown RBP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 SF3B2Q13435 895 aaKnown RBP23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 TERF2Q15554 542 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 C7orf25Q9BPX7 421 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 PPP2R2CQ9Y2T4 447 aa23.79■■□□□ 1.4
SPTBN4-203ENST00000392023 ZBTB7AO95365 584 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 GYPCP04921 128 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 UBXN1Q04323 297 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 KRT79Q5XKE5 535 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 ANKRD40Q6AI12 368 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 LARP4BQ92615 738 aaKnown RBP23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 ANO3Q9BYT9 981 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 CUEDC2Q9H467 287 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 ATRNL1Q5VV63 1379 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 PSMA7O14818 248 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 IDEP14735 1019 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 STAT3P40763 770 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 SYDE2Q5VT97 1194 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 GMLQ99445 158 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 DNAI1Q9UI46 699 aa23.78■■□□□ 1.4
SPTBN4-203ENST00000392023 A0A0U1RQJ8 604 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 LRRC10BA6NIK2 292 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 H7C1D1 291 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 STX10O60499 249 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 KIAA0895Q8NCT3 520 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 ATRIPQ8WXE1 791 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 AMNQ9BXJ7 453 aa23.77■■□□□ 1.4
SPTBN4-203ENST00000392023 FANCGO15287 622 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 SSBP05455 408 aaKnown RBP eCLIP23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 MYL1P05976 194 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 ERCC3P19447 782 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 KCNJ6P48051 423 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 STIM1Q13586 685 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 FBXO11Q86XK2 927 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 GLIS3Q8NEA6 775 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 DUSP9Q99956 384 aaKnown RBP23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 IRX3P78415 501 aaPredicted RBP23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 AMPD3Q01432 767 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 PDIA5Q14554 519 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 NBPF9Q3BBW0 867 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 TTI2Q6NXR4 508 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 CSGALNACT2Q8N6G5 542 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 GMCL1P1Q8NEA9 526 aa23.76■■□□□ 1.39
SPTBN4-203ENST00000392023 BAG6P46379 1132 aa23.75■■□□□ 1.39
SPTBN4-203ENST00000392023 ORC2Q13416 577 aaPredicted RBP23.75■■□□□ 1.39
SPTBN4-203ENST00000392023 PSMD1Q99460 953 aa23.75■■□□□ 1.39
SPTBN4-203ENST00000392023 RAB34Q9BZG1 259 aa23.75■■□□□ 1.39
SPTBN4-203ENST00000392023 HDAC9Q9UKV0 1011 aa23.75■■□□□ 1.39
SPTBN4-203ENST00000392023 C10orf71Q711Q0 1435 aa23.75■■□□□ 1.39
SPTBN4-203ENST00000392023 RAD51AP2Q09MP3 1159 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms