RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 LRRC27Q9C0I9 530 aa12.07□□□□□ -0.48
NLRP3-205ENST00000391827 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
NLRP3-205ENST00000391827 SLC26A4O43511 780 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 MIIPQ5JXC2 388 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
NLRP3-205ENST00000391827 UBXN6Q9BZV1 441 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 BCCIPQ9P287 314 aaKnown RBP eCLIP12.06□□□□□ -0.48
NLRP3-205ENST00000391827 CCDC151A5D8V7 595 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 B4DLN1 442 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 SLC37A4O43826 429 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 GCFC2P16383 781 aaKnown RBP12.06□□□□□ -0.48
NLRP3-205ENST00000391827 TXKP42681 527 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 AMPD2Q01433 879 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 EHHADHQ08426 723 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 PICALMQ13492 652 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 TEX35Q5T0J7 233 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 MEX3CQ5U5Q3 659 aaKnown RBP12.06□□□□□ -0.48
NLRP3-205ENST00000391827 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 LARP4BQ92615 738 aaKnown RBP12.06□□□□□ -0.48
NLRP3-205ENST00000391827 COA7Q96BR5 231 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 CHP1Q99653 195 aa12.06□□□□□ -0.48
NLRP3-205ENST00000391827 NAP1L4Q99733 375 aaKnown RBP12.06□□□□□ -0.48
NLRP3-205ENST00000391827 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 PSMD14O00487 310 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 FCER1AP12319 257 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 NPR1P16066 1061 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 ZBED6P86452 979 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 PSMD2Q13200 908 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 BRD3Q15059 726 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
NLRP3-205ENST00000391827 CCDC170Q8IYT3 715 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 GUF1Q8N442 669 aaKnown RBP12.05□□□□□ -0.48
NLRP3-205ENST00000391827 HNRNPLLQ8WVV9 542 aaKnown RBP12.05□□□□□ -0.48
NLRP3-205ENST00000391827 RAD54LQ92698 747 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 CCDC17Q96LX7 622 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 SLF1Q9BQI6 1058 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 PARD6BQ9BYG5 372 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
NLRP3-205ENST00000391827 TDP2O95551 362 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 PLA2G4AP47712 749 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 KRT83P78385 493 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 SEPT2Q15019 361 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 HYIQ5T013 277 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 MRIQ9BWK5 157 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 GLT8D2Q9H1C3 349 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 SEMA6BQ9H3T3 888 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 USP40Q9NVE5 1235 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 RAB21Q9UL25 225 aa12.05□□□□□ -0.48
NLRP3-205ENST00000391827 MYMKA6NI61 221 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 ZBTB5O15062 677 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 TBC1D8O95759 1140 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 HLA-DOAP06340 250 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 HNRNPH3P31942 346 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 TBC1D8BQ0IIM8 1120 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 CDC42EP5Q6NZY7 148 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 CUL5Q93034 780 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 EIF3CLB5ME19 914 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 ABL1P00519 1130 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 MRPL12P52815 198 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 HERVK_113P62684 666 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 TEKT1Q969V4 418 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 EIF3CQ99613 913 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 TUBBP07437 444 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 CYLC1P35663 651 aaPredicted RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 MCM6Q14566 821 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 FKBP15Q5T1M5 1219 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 MSL3Q8N5Y2 521 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 MKL1Q969V6 931 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 NOC4LQ9BVI4 516 aaKnown RBP12.04□□□□□ -0.48
NLRP3-205ENST00000391827 ARFGAP3Q9NP61 516 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 GPCPD1Q9NPB8 672 aa12.04□□□□□ -0.48
NLRP3-205ENST00000391827 ADAMTSL1Q8N6G6 1762 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
NLRP3-205ENST00000391827 MTIF2P46199 727 aaKnown RBP12.03□□□□□ -0.48
NLRP3-205ENST00000391827 ANKZF1Q9H8Y5 726 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 ZNHIT6Q9NWK9 470 aaKnown RBP12.03□□□□□ -0.48
NLRP3-205ENST00000391827 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
NLRP3-205ENST00000391827 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
NLRP3-205ENST00000391827 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
NLRP3-205ENST00000391827 ARHGAP27Q6ZUM4 889 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 NLGN1Q8N2Q7 840 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 HAS1Q92839 578 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
NLRP3-205ENST00000391827 EPC1Q9H2F5 836 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms