RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTECB2RU33 542 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 DDX39AO00148 427 aaKnown RBP11.43□□□□□ -0.58
LTN1-203ENST00000389195 CAVIN2O95810 425 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 ASIC1P78348 528 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 SPP2Q13103 211 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 BLOC1S4Q9NUP1 217 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 PCDHA12Q9UN75 941 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 TMX2Q9Y320 296 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 SYNRGQ9UMZ2 1314 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POLR2AP24928 1970 aaKnown RBP11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 MYMKA6NI61 221 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 KLRC4O43908 158 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 ARHGAP4P98171 946 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 KIF4BQ2VIQ3 1234 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTEGQ6S5H5 508 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 NELFBQ8WX92 580 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 ZBED3Q96IU2 234 aaPredicted RBP11.43□□□□□ -0.58
LTN1-203ENST00000389195 BPIFA3Q9BQP9 254 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 TANGO6Q9C0B7 1094 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 ZHX3Q9H4I2 956 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
LTN1-203ENST00000389195 NFIBO00712 420 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 IKBKBO14920 756 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 SMARCA1P28370 1054 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 CCZ1BP86790 482 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 CCZ1P86791 482 aaPredicted RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 TPD52L1Q16890 204 aaPredicted RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 IGSF22Q8N9C0 903 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 MLKLQ8NB16 471 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 GMCL1P1Q8NEA9 526 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 RAVER2Q9HCJ3 691 aaKnown RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 TAB2Q9NYJ8 693 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 RGL1Q9NZL6 768 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 KIAA1024Q9UPX6 916 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 GREB1LQ9C091 1923 aaPredicted RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 A0A0U1RQJ8 604 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 RNF225M0QZC1 329 aaPredicted RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 PDE4DQ08499 809 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 KANK3Q6NY19 840 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 MOB2Q70IA6 237 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
LTN1-203ENST00000389195 ATRIPQ8WXE1 791 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 GMCL1Q96IK5 515 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 IKZF4Q9H2S9 585 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
LTN1-203ENST00000389195 ESYT2A0FGR8 921 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 SPDYE3A6NKU9 549 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 SFI1A8K8P3 1242 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
LTN1-203ENST00000389195 OFD1O75665 1012 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 ZNF18P17022 549 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 TNIP1Q15025 636 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 NCAPH2Q6IBW4 605 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 GSDMAQ96QA5 445 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 TRIM9Q9C026 710 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 VCPKMTQ9H867 229 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 KBTBD4Q9NVX7 518 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 MED24O75448 989 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 ZNF76P36508 570 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 CDK5RAP3Q96JB5 506 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 ARID3AQ99856 593 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
LTN1-203ENST00000389195 COL20A1Q9P218 1284 aa11.41□□□□□ -0.58
LTN1-203ENST00000389195 FZD9O00144 591 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
LTN1-203ENST00000389195 ALAS1P13196 640 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 TPM4P67936 248 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 MTF1Q14872 753 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 IL31RAQ8NI17 732 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 ENOX1Q8TC92 643 aaKnown RBP11.4□□□□□ -0.58
LTN1-203ENST00000389195 PIGOQ8TEQ8 1089 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 CCSER1Q9C0I3 900 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 FAM170AA1A519 330 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 EML1O00423 815 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 FLOT1O75955 427 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 KLK7P49862 253 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 HMGCS2P54868 508 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 APTXQ7Z2E3 356 aaKnown RBP11.4□□□□□ -0.58
LTN1-203ENST00000389195 LENG9Q96B70 501 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
LTN1-203ENST00000389195 ABCB11O95342 1321 aa11.4□□□□□ -0.59
LTN1-203ENST00000389195 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
LTN1-203ENST00000389195 PABPC4Q13310 644 aaKnown RBP eCLIP11.39□□□□□ -0.59
LTN1-203ENST00000389195 IRF2BP1Q8IU81 584 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 KIAA0895Q8NCT3 520 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 DDX12PQ92771 950 aa11.39□□□□□ -0.59
LTN1-203ENST00000389195 DESI2Q9BSY9 194 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms