RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 NFIBO00712 420 aa25.23■■□□□ 1.63
CNEP1R1-201ENST00000389134 PDE4DQ08499 809 aa25.23■■□□□ 1.63
CNEP1R1-201ENST00000389134 CAGE1Q8TC20 777 aa25.23■■□□□ 1.63
CNEP1R1-201ENST00000389134 PNMA2Q9UL42 364 aa25.23■■□□□ 1.63
CNEP1R1-201ENST00000389134 NMT2O60551 498 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 NOVP48745 357 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 SYDE2Q5VT97 1194 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 TSHZ3Q63HK5 1081 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 RASGRP2Q7LDG7 609 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 AFAP1L1Q8TED9 768 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 SEC62Q99442 399 aaKnown RBP25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 ZBED2Q9BTP6 218 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 KIAA1217Q5T5P2 1943 aa25.22■■□□□ 1.63
CNEP1R1-201ENST00000389134 B4DLN1 442 aa25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 CALML3P27482 149 aa25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 MRPL12P52815 198 aaKnown RBP25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 WDR5P61964 334 aaKnown RBP25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 PTGISQ16647 500 aa25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 TTBK2Q6IQ55 1244 aa25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 RNF207Q6ZRF8 634 aa25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 PPP1R13LQ8WUF5 828 aa25.21■■□□□ 1.63
CNEP1R1-201ENST00000389134 MYH7BA7E2Y1 1941 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 FAM86C2PA6NEL3 165 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 PARNO95453 639 aaKnown RBP25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 EDNRBP24530 442 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 SLC16A2P36021 539 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 SLC30A10Q6XR72 485 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 SPRED2Q7Z698 418 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 DNERQ8NFT8 737 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 GDPD5Q8WTR4 605 aa25.2■■□□□ 1.62
CNEP1R1-201ENST00000389134 LCHNA4D1U4 455 aa25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 RANBP6O60518 1105 aaKnown RBP25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 TXNP10599 105 aaKnown RBP25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 CTDSPL2Q05D32 466 aa25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 CLEC4DQ8WXI8 215 aa25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 COPS5Q92905 334 aa25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 CD320Q9NPF0 282 aa25.19■■□□□ 1.62
CNEP1R1-201ENST00000389134 RPS6P62753 249 aaKnown RBP25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 ZMYM1Q5SVZ6 1142 aa25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 CNKSR3Q6P9H4 555 aa25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 SESTD1Q86VW0 696 aa25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 RAD9AQ99638 391 aa25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 DCTPP1Q9H773 170 aa25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 INCENPQ9NQS7 918 aa25.18■■□□□ 1.62
CNEP1R1-201ENST00000389134 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 SELPP16109 830 aa25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 CHMP4BP1P59074 171 aa25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 ERVK-21P61565 698 aa25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 TGS1Q96RS0 853 aaKnown RBP25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 FSD1Q9BTV5 496 aa25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 UBE2ZQ9H832 354 aaPredicted RBP25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 SUGCTQ9HAC7 445 aa25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 MICAL3Q7RTP6 2002 aa25.17■■□□□ 1.62
CNEP1R1-201ENST00000389134 TTC41PQ6P2S7 1318 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 MYH6P13533 1939 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 ABHD14A-ACY1A0A1B0GW23 586 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 GJB5O95377 273 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 GPNMBQ14956 572 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 LRRC8DQ7L1W4 858 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 ANAPC4Q9UJX5 808 aa25.16■■□□□ 1.62
CNEP1R1-201ENST00000389134 PRR33A8MZF0 331 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 ORC4O43929 436 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 EFCAB14O75071 495 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 CXCL10P02778 98 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 TOP1P11387 765 aaKnown RBP25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 DEFB103AP81534 67 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 RBL2Q08999 1139 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 LEXMQ3ZCV2 418 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 GDF6Q6KF10 455 aaPredicted RBP25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 TMCO2Q7Z6W1 182 aaPredicted RBP25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 FAM178BQ8IXR5 827 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 GJD3Q8N144 294 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 CTAGE1Q96RT6 745 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 GPCPD1Q9NPB8 672 aa25.15■■□□□ 1.62
CNEP1R1-201ENST00000389134 MYO7AQ13402 2215 aa25.14■■□□□ 1.62
CNEP1R1-201ENST00000389134 FRMPD2Q68DX3 1309 aaPredicted RBP25.14■■□□□ 1.62
CNEP1R1-201ENST00000389134 WDR19Q8NEZ3 1342 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 FOXP2O15409 715 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 ARIH2O95376 493 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 MMP3P08254 477 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 FGRP09769 529 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 CCDC62Q6P9F0 684 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 AFG1LQ8WV93 481 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 TMEM47Q9BQJ4 181 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 MTUS1Q9ULD2 1270 aa25.13■■□□□ 1.61
CNEP1R1-201ENST00000389134 LINC01553A4QN01 128 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 NBNO60934 754 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 CKBP12277 381 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 CASTP20810 708 aaKnown RBP25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 IKBKEQ14164 716 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 ALYREFQ86V81 257 aaKnown RBP25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 RGS22Q8NE09 1264 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 DHX38Q92620 1227 aaKnown RBP25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 CRBNQ96SW2 442 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 TCP11L1Q9NUJ3 509 aa25.12■■□□□ 1.61
CNEP1R1-201ENST00000389134 GH1P01241 217 aa25.11■■□□□ 1.61
CNEP1R1-201ENST00000389134 PDHBP11177 359 aa25.11■■□□□ 1.61
CNEP1R1-201ENST00000389134 ALADP13716 330 aa25.11■■□□□ 1.61
CNEP1R1-201ENST00000389134 KCNA5P22460 613 aa25.11■■□□□ 1.61
CNEP1R1-201ENST00000389134 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms