RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 STRN3Q13033 797 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 LSAMPQ13449 338 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 DHCR24Q15392 516 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 CDCA2Q69YH5 1023 aaPredicted RBP7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 ZPBP2Q6X784 338 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 FERMT3Q86UX7 667 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 ANKLE2Q86XL3 938 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 RPUSD2Q8IZ73 545 aaKnown RBP7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 PRPF38AQ8NAV1 312 aaKnown RBP7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 USP7Q93009 1102 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 CARS2Q9HA77 564 aaKnown RBP7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 CABP5Q9NP86 173 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 BTG4Q9NY30 223 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 LMCD1Q9NZU5 365 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 SLC5A6Q9Y289 635 aa7.46□□□□□ -1.22
RNU6-40P-201ENST00000384254 ALG1L2C9J202 215 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 MSCO60682 206 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 SOD2P04179 222 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 GRK2P25098 689 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 GRK3P35626 688 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 SCNN1BP51168 640 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 INF2Q27J81 1249 aa7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 DDX42Q86XP3 938 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU6-40P-201ENST00000384254 C7orf72A4D263 438 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 BRINP1O60477 761 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 GAS7O60861 476 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 COBLO75128 1261 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 S100BP04271 92 aaPredicted RBP7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 PMLP29590 882 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 ZP2Q05996 745 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 PCBP1Q15365 356 aaKnown RBP eCLIP7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 PRSS36Q5K4E3 855 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 AFAP1L2Q8N4X5 818 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 IGSF22Q8N9C0 903 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 FBXW5Q969U6 566 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 CCDC120Q96HB5 630 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 TMEM169Q96HH4 297 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 MAP6Q96JE9 813 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 TTC1Q99614 292 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 CLDND1Q9NY35 253 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 SLAMF8Q9P0V8 285 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 ZKSCAN5Q9Y2L8 839 aa7.44□□□□□ -1.22
RNU6-40P-201ENST00000384254 PDGFRBP09619 1106 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 BCL6P41182 706 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 CDKN1CP49918 316 aaPredicted RBP7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 DNM2P50570 870 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 MBLAC2Q68D91 279 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 KIF18BQ86Y91 864 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 USP33Q8TEY7 942 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 TRMT2BQ96GJ1 504 aaKnown RBP7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 CELF4Q9BZC1 486 aaKnown RBP7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 CATSPERZQ9NTU4 200 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 COA3Q9Y2R0 106 aaPredicted RBP7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 COQ6Q9Y2Z9 468 aa7.43□□□□□ -1.22
RNU6-40P-201ENST00000384254 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 CCDC66A2RUB6 948 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 M0R2C6 588 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 ARNTLO00327 626 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 KIR2DL1P43626 348 aaPredicted RBP7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 KIR2DL2P43627 348 aaPredicted RBP7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 BNIP3Q12983 259 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 SLC14A2Q15849 920 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 CRY1Q16526 586 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 EP400NLQ6ZTU2 488 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 WDR66Q8TBY9 1149 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 PI4K2BQ8TCG2 481 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 BCL7CQ8WUZ0 217 aaPredicted RBP7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 ALPK1Q96QP1 1244 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 MTFR1LQ9H019 292 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 IFT22Q9H7X7 185 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 ANGEL1Q9UNK9 670 aaKnown RBP7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 TAF6LQ9Y6J9 622 aa7.42□□□□□ -1.22
RNU6-40P-201ENST00000384254 A0A1W2PQJ5 194 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 H7BY64 318 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 GLRX3O76003 335 aaKnown RBP7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 RTP1P59025 263 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 IL2P60568 153 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 CHRNEQ04844 493 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 FAM50AQ14320 339 aaKnown RBP7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 SEPT7Q16181 437 aaKnown RBP7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 PLEKHG6Q3KR16 790 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 TMEM177Q53S58 311 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 RNF219Q5W0B1 726 aaPredicted RBP7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 CEP128Q6ZU80 1094 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 CEP68Q76N32 757 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 STRA8Q7Z7C7 330 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 VSIG10LQ86VR7 867 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 ANKS4BQ8N8V4 417 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 KCNJ15Q99712 375 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 FAM126AQ9BYI3 521 aaPredicted RBP7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 MARCH2Q9P0N8 246 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 GULP1Q9UBP9 304 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 TMEM59LQ9UK28 342 aa7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 APOBEC2Q9Y235 224 aaKnown RBP7.41□□□□□ -1.22
RNU6-40P-201ENST00000384254 ZNF281Q9Y2X9 895 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms