RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 HOXC12P31275 282 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 GTF2F1P35269 517 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 LIMS1P48059 325 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 GFRA1P56159 465 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 WWC2Q6AWC2 1192 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 PPIL6Q8IXY8 311 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 CKAP2LQ8IYA6 745 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 TMEM145Q8NBT3 493 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 DPF3Q92784 378 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 MMP19Q99542 508 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 USP35Q9P2H5 1018 aa5.21□□□□□ -1.58
RNU1-39P-201ENST00000383897 U2SURPO15042 1029 aaKnown RBP5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 MC3RP41968 323 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 VMACQ2NL98 169 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 ZNF385BQ569K4 471 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 TMEFF1Q8IYR6 380 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 ALG3Q92685 438 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 DIO2Q92813 273 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 IER2Q9BTL4 223 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 FBXL7Q9UJT9 491 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 PCDHA5Q9Y5H7 936 aa5.2□□□□□ -1.58
RNU1-39P-201ENST00000383897 C22orf46C9J442 243 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 ARNTLO00327 626 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 IRS4O14654 1257 aaPredicted RBP5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 LCP1P13796 627 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 PMLP29590 882 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 DENND5AQ6IQ26 1287 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 NETO2Q8NC67 525 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 KREMEN2Q8NCW0 462 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 CHAMP1Q96JM3 812 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 EPN3Q9H201 632 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 EPB41L4AQ9HCS5 686 aaPredicted RBP5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 NUDT5Q9UKK9 219 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 PCDHA2Q9Y5H9 948 aa5.19□□□□□ -1.58
RNU1-39P-201ENST00000383897 MYO1BO43795 1136 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 CPP00450 1065 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 SCG5P05408 212 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 PFKLP17858 780 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 BCL6P41182 706 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 AFF3P51826 1226 aaKnown RBP5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 RPL11P62913 178 aaKnown RBP5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 KCNAB2Q13303 367 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 TCERG1LQ5VWI1 586 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 E4F1Q66K89 784 aaPredicted RBP5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 CNKSR3Q6P9H4 555 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 CEP68Q76N32 757 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 NLRP10Q86W26 655 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 RCBTB1Q8NDN9 531 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 PLEKHO2Q8TD55 490 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 SREK1Q8WXA9 508 aaKnown RBP5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 C1orf159Q96HA4 380 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 PEX11GQ96HA9 241 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 PWWP2AQ96N64 755 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 FAN1Q9Y2M0 1017 aa5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 TIMM13Q9Y5L4 95 aaPredicted RBP5.18□□□□□ -1.58
RNU1-39P-201ENST00000383897 PRODHO43272 600 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 ASGR2P07307 311 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 ATF2P15336 505 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 FBLN1P23142 703 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 LTBRP36941 435 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 ACBD5Q5T8D3 534 aaPredicted RBP5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 YOD1Q5VVQ6 348 aaPredicted RBP5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 IQCEQ6IPM2 695 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 USP53Q70EK8 1073 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 SPATC1Q76KD6 591 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 FAM129CQ86XR2 697 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 KCTD13Q8WZ19 329 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 TRMT2BQ96GJ1 504 aaKnown RBP5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 DRC1Q96MC2 740 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 CCDC140Q96MF4 163 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 AARSD1Q9BTE6 412 aaKnown RBP5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 ARHGEF4Q9NR80 690 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 PFDN2Q9UHV9 154 aa5.17□□□□□ -1.58
RNU1-39P-201ENST00000383897 BLACEA4D250 179 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 DLX3O60479 287 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 NCAM1P13591 858 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 BMP7P18075 431 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 IGFBP6P24592 240 aaPredicted RBP5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 HSP90AA2PQ14568 343 aaPredicted RBP5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 TARBP2Q15633 366 aaKnown RBP5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 SLC35F1Q5T1Q4 408 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 DCP2Q8IU60 420 aaKnown RBP5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 ST13P5Q8NFI4 369 aaPredicted RBP5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 TSPAN17Q96FV3 270 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 TMEM169Q96HH4 297 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 AP5M1Q9H0R1 490 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 CLDND1Q9NY35 253 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 IRS2Q9Y4H2 1338 aa5.16□□□□□ -1.58
RNU1-39P-201ENST00000383897 IQCA1LA6NCM1 817 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 PDPK1O15530 556 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 CAPNS1P04632 268 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 FOXO4P98177 505 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 MAP4K2Q12851 820 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 MTERF2Q49AM1 385 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 FBLN7Q53RD9 439 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 SIAH1Q8IUQ4 282 aa5.15□□□□□ -1.59
RNU1-39P-201ENST00000383897 SGSM3Q96HU1 749 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms