RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 FAM133AQ8N9E0 248 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 CSRNP1Q96S65 589 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 PNMA6AP0CW24 399 aaPredicted RBP18.8■□□□□ 0.6
SGCB-201ENST00000381431 TAOK1Q7L7X3 1001 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 PANX2Q96RD6 677 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 NHEJ1Q9H9Q4 299 aaPredicted RBP18.8■□□□□ 0.6
SGCB-201ENST00000381431 ADAMTS1Q9UHI8 967 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 ZNF335Q9H4Z2 1342 aaPredicted RBP18.8■□□□□ 0.6
SGCB-201ENST00000381431 TEX33O43247 280 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 HEXIM1O94992 359 aaKnown RBP18.8■□□□□ 0.6
SGCB-201ENST00000381431 TBC1D8O95759 1140 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 FOSP01100 380 aaPredicted RBP18.8■□□□□ 0.6
SGCB-201ENST00000381431 CCT5P48643 541 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 C2orf54Q08AI8 447 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 NDST4Q9H3R1 872 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 AZI2Q9H6S1 392 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 ARAP3Q8WWN8 1544 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 SPHKAPQ2M3C7 1700 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 GUCY1A2P33402 732 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 RABL6Q3YEC7 729 aaPredicted RBP18.79■□□□□ 0.6
SGCB-201ENST00000381431 IWS1Q96ST2 819 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 STIM2Q9P246 746 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 ARHGAP25P42331 645 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 GYS2P54840 703 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 EXOSC10Q01780 885 aaKnown RBP18.79■□□□□ 0.6
SGCB-201ENST00000381431 RASA3Q14644 834 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 MESDQ14696 234 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.79■□□□□ 0.6
SGCB-201ENST00000381431 NCAPD2Q15021 1401 aa18.79■□□□□ 0.6
SGCB-201ENST00000381431 NAA25Q14CX7 972 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 TAB3Q8N5C8 712 aaPredicted RBP18.78■□□□□ 0.6
SGCB-201ENST00000381431 DEPTORQ8TB45 409 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 BRIP1Q9BX63 1249 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 VPS37BQ9H9H4 285 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 POLD4Q9HCU8 107 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 BUB1BO60566 1050 aaPredicted RBP18.78■□□□□ 0.6
SGCB-201ENST00000381431 ARL6IP4Q66PJ3 421 aaKnown RBP18.78■□□□□ 0.6
SGCB-201ENST00000381431 APBB1IPQ7Z5R6 666 aaPredicted RBP18.78■□□□□ 0.6
SGCB-201ENST00000381431 RIC8AQ9NPQ8 531 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 BAIAP2L1Q9UHR4 511 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 PPP2R5DQ14738 602 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 HHATQ5VTY9 493 aa18.78■□□□□ 0.6
SGCB-201ENST00000381431 SH3RF3Q8TEJ3 882 aaPredicted RBP18.78■□□□□ 0.6
SGCB-201ENST00000381431 VGLL3A8MV65 326 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 CACNB3P54284 484 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 SLC7A5Q01650 507 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 ARHGEF16Q5VV41 709 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 TEKT3Q9BXF9 490 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 OSBPL5Q9H0X9 879 aaPredicted RBP18.77■□□□□ 0.6
SGCB-201ENST00000381431 ABCB6Q9NP58 842 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 CAPN7Q9Y6W3 813 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 PP2D1A8MPX8 630 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 RNF40O75150 1001 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 BBOX1O75936 387 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 CLUL1Q15846 466 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 FAM186BQ8IYM0 893 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 ZNF408Q9H9D4 720 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 KANSL2Q9H9L4 492 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.6
SGCB-201ENST00000381431 FEZ2Q9UHY8 353 aaPredicted RBP18.77■□□□□ 0.6
SGCB-201ENST00000381431 PALLDQ8WX93 1383 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 OTUD6AQ7L8S5 288 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 MB21D1Q8N884 522 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 SUGCTQ9HAC7 445 aa18.77■□□□□ 0.6
SGCB-201ENST00000381431 USP31Q70CQ4 1352 aa18.77■□□□□ 0.59
SGCB-201ENST00000381431 A0A0G2JLW4 131 aa18.77■□□□□ 0.59
SGCB-201ENST00000381431 DMTNQ08495 405 aa18.77■□□□□ 0.59
SGCB-201ENST00000381431 DPF2Q92785 391 aa18.77■□□□□ 0.59
SGCB-201ENST00000381431 TMEM47Q9BQJ4 181 aa18.77■□□□□ 0.59
SGCB-201ENST00000381431 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 POTEMA6NI47 508 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 ADCY8P40145 1251 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 LIG4P49917 911 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 KIF11P52732 1056 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 SNAP25P60880 206 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 MAGOHBQ96A72 148 aaKnown RBP18.76■□□□□ 0.59
SGCB-201ENST00000381431 ZNF609O15014 1411 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 CYP19A1P11511 503 aaPredicted RBP18.76■□□□□ 0.59
SGCB-201ENST00000381431 ATF7P17544 494 aaPredicted RBP18.76■□□□□ 0.59
SGCB-201ENST00000381431 PRCPP42785 496 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 MCTP2Q6DN12 878 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 CROCCP2Q86T23 111 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 DHX40Q8IX18 779 aaKnown RBP18.76■□□□□ 0.59
SGCB-201ENST00000381431 NLGN1Q8N2Q7 840 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 PLCD3Q8N3E9 789 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 PCIF1Q9H4Z3 704 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 TRIM37O94972 964 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 C1orf112Q9NSG2 853 aa18.76■□□□□ 0.59
SGCB-201ENST00000381431 PPEF1O14829 653 aaPredicted RBP18.75■□□□□ 0.59
SGCB-201ENST00000381431 SRGAP2O75044 1071 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 GFPT2O94808 682 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 GCFC2P16383 781 aaKnown RBP18.75■□□□□ 0.59
SGCB-201ENST00000381431 STX2P32856 288 aa18.75■□□□□ 0.59
SGCB-201ENST00000381431 ZNF131P52739 623 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms