RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TRPV1Q8NER1 839 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 BARHL2Q9NY43 387 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
SNRPB-201ENST00000381342 SYNGAP1Q96PV0 1343 aa18.62■□□□□ 0.57
SNRPB-201ENST00000381342 GCOM1H8Y6P7 765 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-201ENST00000381342 hCG_1984214I3L0E3 225 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 CDKL5O76039 1030 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 CTDNEP1O95476 244 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 POLR2MP0CAP2 368 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 RARBP10826 455 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 PPP1R18Q6NYC8 613 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 MAMDC4Q6UXC1 1216 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 ZNF713Q8N859 430 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-201ENST00000381342 SENP6Q9GZR1 1112 aaPredicted RBP18.61■□□□□ 0.57
SNRPB-201ENST00000381342 MAF1Q9H063 256 aa18.61■□□□□ 0.57
SNRPB-201ENST00000381342 DNM1LO00429 736 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 UBE2SQ16763 222 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 ANO1Q5XXA6 986 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 CCDC83Q8IWF9 413 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 C7orf61Q8IZ16 206 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 TAAR1Q96RJ0 339 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.6■□□□□ 0.57
SNRPB-201ENST00000381342 ADD3Q9UEY8 706 aaKnown RBP18.6■□□□□ 0.57
SNRPB-201ENST00000381342 KIAA1217Q5T5P2 1943 aa18.6■□□□□ 0.57
SNRPB-201ENST00000381342 STK36Q9NRP7 1315 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 ASB14A6NK59 587 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 SNAI1O95863 264 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 AKR1A1P14550 325 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 EIF2AK2P19525 551 aaKnown RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 MNX1P50219 401 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 HABP4Q5JVS0 413 aaKnown RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 FCHSD1Q86WN1 690 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 NSUN7Q8NE18 718 aaKnown RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 DNERQ8NFT8 737 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 AIFM3Q96NN9 605 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 VPS54Q9P1Q0 977 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 ZHX1Q9UKY1 873 aaPredicted RBP18.59■□□□□ 0.57
SNRPB-201ENST00000381342 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
SNRPB-201ENST00000381342 MEIS2O14770 477 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 JAK2O60674 1132 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 DEXIO95424 95 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 ADCY7P51828 1080 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.56
SNRPB-201ENST00000381342 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 RNF180Q86T96 592 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 FBXO16Q8IX29 292 aaPredicted RBP18.58■□□□□ 0.56
SNRPB-201ENST00000381342 SAMD3Q8N6K7 520 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 CUL5Q93034 780 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 RMDN3Q96TC7 470 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 XPNPEP3Q9NQH7 507 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 PXMP2Q9NR77 195 aa18.58■□□□□ 0.56
SNRPB-201ENST00000381342 SH2B1Q9NRF2 756 aaPredicted RBP18.58■□□□□ 0.56
SNRPB-201ENST00000381342 MAP3K20Q9NYL2 800 aaKnown RBP18.58■□□□□ 0.56
SNRPB-201ENST00000381342 COLQQ9Y215 455 aaPredicted RBP18.58■□□□□ 0.56
SNRPB-201ENST00000381342 PIK3CDO00329 1044 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 ZNF865P0CJ78 1059 aaPredicted RBP18.57■□□□□ 0.56
SNRPB-201ENST00000381342 COL6A1P12109 1028 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 EDNRBP24530 442 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 ARHGEF16Q5VV41 709 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 EEPD1Q7L9B9 569 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 MORC4Q8TE76 937 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 NSUN6Q8TEA1 469 aaKnown RBP18.57■□□□□ 0.56
SNRPB-201ENST00000381342 KATNBL1Q9H079 304 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 ABHD16BQ9H3Z7 469 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 RIC8AQ9NPQ8 531 aa18.57■□□□□ 0.56
SNRPB-201ENST00000381342 SMCO2A6NFE2 343 aa18.56■□□□□ 0.56
SNRPB-201ENST00000381342 PDE4DQ08499 809 aa18.56■□□□□ 0.56
SNRPB-201ENST00000381342 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
SNRPB-201ENST00000381342 IL31RAQ8NI17 732 aa18.56■□□□□ 0.56
SNRPB-201ENST00000381342 SPC25Q9HBM1 224 aa18.56■□□□□ 0.56
SNRPB-201ENST00000381342 ORC3Q9UBD5 711 aaPredicted RBP18.56■□□□□ 0.56
SNRPB-201ENST00000381342 FRMPD4Q14CM0 1322 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 LOC102724159A0A0B4J2E5 919 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 ESYT2A0FGR8 921 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 ADAMTS3O15072 1205 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
SNRPB-201ENST00000381342 PWP2Q15269 919 aaKnown RBP18.55■□□□□ 0.56
SNRPB-201ENST00000381342 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 CCDC148Q8NFR7 591 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 CCDC12Q8WUD4 166 aaPredicted RBP18.55■□□□□ 0.56
SNRPB-201ENST00000381342 LENG1Q96BZ8 264 aaPredicted RBP18.55■□□□□ 0.56
SNRPB-201ENST00000381342 TMX3Q96JJ7 454 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 MPHOSPH6Q99547 160 aaKnown RBP18.55■□□□□ 0.56
SNRPB-201ENST00000381342 PDCD2LQ9BRP1 358 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 PRKAG2Q9UGJ0 569 aa18.55■□□□□ 0.56
SNRPB-201ENST00000381342 ZMYND8Q9ULU4 1186 aaPredicted RBP18.55■□□□□ 0.56
SNRPB-201ENST00000381342 FDPSP14324 419 aaKnown RBP18.54■□□□□ 0.56
SNRPB-201ENST00000381342 PGM5Q15124 567 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 LRRC41Q15345 812 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 PGBD1Q96JS3 809 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 ZMYND12Q9H0C1 365 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 TMEM260Q9NX78 707 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 MYH7BA7E2Y1 1941 aa18.54■□□□□ 0.56
SNRPB-201ENST00000381342 B4DLN1 442 aa18.53■□□□□ 0.56
SNRPB-201ENST00000381342 ADCY6O43306 1168 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms